| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0932 |
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| Symbol | |
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| ID | 6478205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1079474 |
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| End bp | 1080691 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642730096 |
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| Product | twitching motility protein |
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| Protein accession | YP_002027320 |
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| Protein GI | 194364710 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0641529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.800649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGGC AGCGCGCAGC AAGGCGCGGC CGTCCCCGCG ATGTCCCCTC CACCGACCGA
TTCCTGGAGC CTTTCGTGAA CACCACCGCC ACCACCATCG ATTTCACATC GTTCCTCAAG
CTGATGGCGC ACCAGCGCGC CTCGGACCTG TTCATCACTG CAGGCATGCC GCCGGCGATG
AAGGTCAACG GCAAGATCTC GCCGATCACG CAGACACCAC TGACCCCGCA GCAGAGCCGC
GACCTGGTGC TGAACGTGAT GACCCCGGCG CAGCGCGAAG AGTTCGAAAA GACCCACGAG
TGCAACTTCG CCATCGGCCT GTCCGGTGTC GGCCGCTTCC GTGTCAGCTG CTTCTACCAG
CGCAACCAGG TGGGCATGGT GCTGCGTCGT ATCGAGACGC GCATTCCCAC CGTGGAAGAG
CTGAGCCTGC CGCCGATCAT CAAGACGCTG GCGATGACCA AGCGCGGCAT CATCCTGTTC
GTCGGCGCCA CCGGTACCGG TAAATCGACC TCGCTGGCAG CGATGATCGG CTACCGCAAC
CAGAACTCGA CCGGCCACAT CATAACCATC GAAGACCCGA TCGAATTCGT GCACAAGCAT
GAAGGCTGCA TCATCACCCA GCGCGAAGTC GGCATCGATA CCGACAGCTG GGAAGCCGCG
CTGAAGAACA CCCTGCGCCA GGCGCCCGAT GTGATCATGA TCGGCGAAGT GCGTACCCGC
GAAGGCATGG ACCACGCCAT CGCGTTCGCC GAAACCGGCC ACCTGGTGCT GTGCACCCTG
CATGCCAATA ACGCCAACCA GGCGATGGAT CGCATCGTCA ACTTCTTCCC GGAAGATCGT
CGCAACCAGT TGCTGATGGA TCTGTCGCTG AACCTGAAGG GCGTGGTTGC GCAGCAGCTG
GTGCCGTCGC CCGATGGCCG CTCGCGCAAG GTGGCGATGG AGATCCTGCT GGGCACGCCG
CTGGTGCAGG ACTACATCCG CGATGGCGAG ATCCACAAGC TGAAGGAAGT GATGAAGGAT
TCGGTCCAGC TGGGCATGAA GACCTTCGAC CAGAGCCTGT TCGAGCTGTA CCAGGCCGGC
GAGATCAGCT ACGAGGACGC ACTGCGCTAC GCCGATTCGC AGAACGAAGT GCGCCTGCGC
ATCAAGCTCA GCCAGGGCGG CGACGCGCGC ACCCTGTCGC AGGGGCTGGA TGGCGTGGAG
ATCTCCGAGA TCCGGTGA
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| Protein sequence | MAGQRAARRG RPRDVPSTDR FLEPFVNTTA TTIDFTSFLK LMAHQRASDL FITAGMPPAM
KVNGKISPIT QTPLTPQQSR DLVLNVMTPA QREEFEKTHE CNFAIGLSGV GRFRVSCFYQ
RNQVGMVLRR IETRIPTVEE LSLPPIIKTL AMTKRGIILF VGATGTGKST SLAAMIGYRN
QNSTGHIITI EDPIEFVHKH EGCIITQREV GIDTDSWEAA LKNTLRQAPD VIMIGEVRTR
EGMDHAIAFA ETGHLVLCTL HANNANQAMD RIVNFFPEDR RNQLLMDLSL NLKGVVAQQL
VPSPDGRSRK VAMEILLGTP LVQDYIRDGE IHKLKEVMKD SVQLGMKTFD QSLFELYQAG
EISYEDALRY ADSQNEVRLR IKLSQGGDAR TLSQGLDGVE ISEIR
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