| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0930 |
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| Symbol | |
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| ID | 6478203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1077662 |
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| End bp | 1078339 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642730094 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002027318 |
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| Protein GI | 194364708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.246462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.758463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCACTC CCCTGCCCCA GATCCTGAGC AACCTGCACG CCGCCGCCGA GGCCGCTGGC
AGGCCCGATC CACGCCTGCT GGCGGTGTCC AAGACCCAGC CGGCCGAGGC CGTGGCCGCG
CTGGCCGCAC AGGGCCAGCA CGCCTTCGGC GAGAACTACG TGCAGGAAGC ACTGGCCAAG
ATGCAGGCGC TGCAGCACCT GGACCTGGAA TGGCACCTGA TCGGCCACTT GCAGTCGAAC
AAGGCCGAGG CCGTGGCCAG CCACTTCGAC TGGGTGCAGA GCGTGGACCG GCCCAAGCTG
GTGACCGCGC TGGCACGCCA TCGCCCCGTC GCACGCGGCC CGCTGAACGT GCTGATCCAG
GTCAACATCG ACGACGAATC CAGCAAGCAC GGCTGTGCAC CAGAGGATGT GGACGCGCTG
GCTGCCGCCA TTGCCGCCGA ACCCAGCCTG CGCCTGCGCG GTCTGATGGC GATTCCCGCA
CCGTGGCCCG AGGCCGAGCG CCGCCGGGAT GCATTCGTGC GCATGCGCAC ACTTTTCCAG
TCGTTGGTTA CCCAGCACGC GCAGATCGAC ACGCTGTCGA TGGGCATGAG CAGCGACTAC
GCCGAGGCCA TCGCCGAGGG CGCCACCCTG GTGCGTATCG GCACCGCTCT GTTCGGCGCG
CGCCCGCGCC CGGCCTGA
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| Protein sequence | MATPLPQILS NLHAAAEAAG RPDPRLLAVS KTQPAEAVAA LAAQGQHAFG ENYVQEALAK
MQALQHLDLE WHLIGHLQSN KAEAVASHFD WVQSVDRPKL VTALARHRPV ARGPLNVLIQ
VNIDDESSKH GCAPEDVDAL AAAIAAEPSL RLRGLMAIPA PWPEAERRRD AFVRMRTLFQ
SLVTQHAQID TLSMGMSSDY AEAIAEGATL VRIGTALFGA RPRPA
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