Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0928 |
Symbol | |
ID | 6478201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1075887 |
End bp | 1076762 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642730092 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002027316 |
Protein GI | 194364706 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0490463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC TTCGCTGCAT GCAGGCCTTT GTCGCCGTGG CCGAGCGCGG CAGCTTCACC GGTGCCGCCG AGCAGCTGCA GGTCTCGGCG GTGATGGTGG GCAAGTACAT CCAGCAGCTG GAGGCGCACC TGGGTACGGC GCTGCTGCAG CGGAACACCC GGCGCCAGCG CCTGACCGAA GCCGGCAGCG CCTACCTGGC CGGTTGTCGG CAGGTGCTGG AGCAGGTGCA GCAGGCCGAG GCCGATGTCG CCGGCCTGCA GGTGCAGCCA CGGGGCCTGC TGCGGGTCAG CGCGCCGACC ACCTGGGGCA GCTGCGTGCT GGCGCCGGTA CTGTCCGGGC TGCTGCGTGA GCAGCCGTTG CTGAACATCG AACTGGACCT GAGCAACCGC CGCGTGGACC TGATCGAGGA TGGCTTCGAC GTGGCAATCC GCGTTGGGCC GCTGCCGTCA CAGGAAGTGG TGGCGCGGCC GTTGCCACCG TACGCGATGA GCCTGTGCGC GGCACCGTCC TATCTGCGCC GGCGTGGCAC GCCGCGCACC CCTGAGGATC TGGCCGGGCA TGACTGCCTG AGCCATCTGG CCTGGCGCGG TGGCCATGGC TGGCAGCTGG CCAACGGTGA ACAGGTGGAT TGGGAGGCGC GGCTGACCTG CAATGATGGT GTTGCACTGC GCGAGGCCGC CGTCGCCGGG ACAGGGCTGG TGCTGCAACC GACCGCACTG CTGGCCGGCG AGATCGCGGC AGGGCGGTTG AAGCCCCTGC TGCGCGACTA CCTGCCGGAA CCGCGACCGA TGCACCTGAT CTACCTGCCG GATCGACGGC CGCGTCCGCG CCTGCAGTGC TTCGTCGATT TCGTCATGGC CACATTGGGG CGGTGA
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Protein sequence | MDTLRCMQAF VAVAERGSFT GAAEQLQVSA VMVGKYIQQL EAHLGTALLQ RNTRRQRLTE AGSAYLAGCR QVLEQVQQAE ADVAGLQVQP RGLLRVSAPT TWGSCVLAPV LSGLLREQPL LNIELDLSNR RVDLIEDGFD VAIRVGPLPS QEVVARPLPP YAMSLCAAPS YLRRRGTPRT PEDLAGHDCL SHLAWRGGHG WQLANGEQVD WEARLTCNDG VALREAAVAG TGLVLQPTAL LAGEIAAGRL KPLLRDYLPE PRPMHLIYLP DRRPRPRLQC FVDFVMATLG R
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