Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0913 |
Symbol | |
ID | 6478186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1055623 |
End bp | 1057002 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642730077 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002027301 |
Protein GI | 194364691 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.656272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGTT CGCTCACCCG CATCGAATCG GTCATCCAGA CCGTCCGCAC CCGCATCGGT GCGCGAGTGG ATGGCCCCGG CTCCCGCCTG CCCTCGGTAC GTGCGCAGGC GGCGGCGATG GGGGTTTCGG TCTCCACCGT GGTCGAGGCC TACGAGCGCC TGGCCGCCGA AGGCCTGATC AGCGCTCGCG CAGGTTCGGG CTTCTACGTC AGTGGCCCGG CGGCACCGCT GGCGCTGGCC GAGATGGAGC CGCGGCTGGA CCGCGCGGTG GATCCGCTGT GGGTATCACG GCAATCGCTG GAAACACCGG CCGGTCACCT CAAACCGGGC TGTGGCTGGA TGCCCAGCGA TTGGCTGTAC CACGACGGCA TGCGTCGTGG CCTGCGCCGG CTGGCGCGCG CCGATGCATC ACAACTGGTC GACTACGCCG GGCCGCTCGG CCTGCCTGCG CTGCGCCAGT TGCTGCAACG GCGTTCGGCC GCAGTGGGCA TCGATGCGCC GATGGAACAG ATCCTGCTGA CCGAATCGGG CACGCATTCG GTCGAGCTGA TCTGCCGTTT CCTGCTCAAG CCCGGCGACT GCGTGCTGGT CGATGACCCC AGCTACTTCA ACTACCACGC GTTGCTGAAG GCACACCAGG TGCAGGCCAT CGGTGTGCCG TACACGCACA GCGGCCCGGA CCTGGAAGCG TTCGCGCAGG CACTGCAGGC GCATTCGCCG CGGCTGTACA TCACCAATTC CGGCCTGCAC AACCCGACCG GCGCCATATT GTCGGCCAGC ACTGCCCATC GCCTGCTGGG CCTGGCCGAA CGCAGCGAAC TGATCATCGT TGAGGATGAC ATCTTCGCCG ACTTTGAACT GCAGCCTGCA CCGCGACTGG CCGCGCTCGA TGGACTGTCG CGGGTGATCC ACGTCGGCAG CTTCTCCAAA ACACTGTCGG CTGCATCGCG CTGCGGCTAC ATCGCTGCCC GCCACGAATG GATCGAGGCG CTGACCGACC TGAAGCTGGC CACCAGCTTC GGTGGCGGTC ACCTGGCGAT GCAGTTGATG CACATCGCGC TGACCGACAG CGGCTACCGC CGCCACATGC AGTCGGTGCG TTCGCGGCTG GCCGATGCGC GCCGGCACAC GCTGCGGAAG CTGCAGGCGC TGGGCATCAC GCCGTGGCTG CAGCCGGAAG CCGGGCTCTT CCTGTGGTGC CAGCTGCCCG ATGGCCGCGA TGCCGCCGCA CTGGCCCGGC AATGCCTGCG CGAGGGCATC GTGCTGGCAC CGGGCAACGC GTTCAGTCAG TCGCAGCGCG CGGCCGACTA TGTACGTTTC AACGTTTCGC AGTGCCAGGA CCCGAGGATC TGGCAGGTAC TGGCGCGGGA ACTGCGCTGA
|
Protein sequence | MPRSLTRIES VIQTVRTRIG ARVDGPGSRL PSVRAQAAAM GVSVSTVVEA YERLAAEGLI SARAGSGFYV SGPAAPLALA EMEPRLDRAV DPLWVSRQSL ETPAGHLKPG CGWMPSDWLY HDGMRRGLRR LARADASQLV DYAGPLGLPA LRQLLQRRSA AVGIDAPMEQ ILLTESGTHS VELICRFLLK PGDCVLVDDP SYFNYHALLK AHQVQAIGVP YTHSGPDLEA FAQALQAHSP RLYITNSGLH NPTGAILSAS TAHRLLGLAE RSELIIVEDD IFADFELQPA PRLAALDGLS RVIHVGSFSK TLSAASRCGY IAARHEWIEA LTDLKLATSF GGGHLAMQLM HIALTDSGYR RHMQSVRSRL ADARRHTLRK LQALGITPWL QPEAGLFLWC QLPDGRDAAA LARQCLREGI VLAPGNAFSQ SQRAADYVRF NVSQCQDPRI WQVLARELR
|
| |