Gene Smal_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0908 
Symbol 
ID6478181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1050610 
End bp1052109 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID642730072 
ProductPepSY-associated TM helix domain protein 
Protein accessionYP_002027296 
Protein GI194364686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.957301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC GATCCACCGC CAAGCGCTGG ACCTACCTGG TGCACCGCTG GCTGGGCATC 
GGCGGATGCC TGCTGATGCT GTTGTGGTTC GTCAGCGGGT TGGTGATGTT GTTCATCGGC
TACCCGAAGC TGACGCCCGG TGAACGTCTG GCGGCATTGC CGGTGCTGCC GGAGGCCCAC
GATCTGCACG GGCTGTCGGT GCTGCCTGCC GCCGTGCAGG CCGAGCCGGA GGCCGTGGCA
CTGACCACGC TGCGCGGCGA GCCGGCGTAT GTGGTGCGCG CGGGAAGCAA CGTGGGGGCG
TGGTCAGCCG TCACTGGCCA GGCCCTGCTG CCGGTGTCGG CACAGCGCGC CGAAGCATCG
GCGGCACAGT TCGCCGGCGG TCCGGCCTTC GTTGGTGCGA TGCGGGTGGA CGAGGATCGC
TGGACGCATT CGCGCGCGCT GGACGCGCAC CGGCCGCTGT ACCGGGTGGA GGTGGGGGGC
GCACAGCCCG GTGACCTGTA TGTGTCCTCG CGCACCGGTG AAGTGGTGCT GGACGCACCG
CATGTGCAGC AGCGCTGGAA CTATGTGGGG GCCTGGCTGC ACTGGCTGTA TTTCCTGCGC
ATGCAGTCGG TGGATCCGGT GTGGACGTGG GTGGTGATCG TGCTGTCCGC GCTGTGCACG
GTGGCGGCGG TCAGCGGGAT CGTGGTGGGG GTATGGCGCT GGCGTTTCCG TGGGCACTAT
CGCTCGGGTG CGAAGACACC GTATGTCGAG CCGTGGATGC GCTGGCACCA TCTGATCGGA
CTGGTGGCGG CCGCCTTCGT TTTTACCTGG ATCTTCAGCG GGCTGATGTC GATGAATCCA
TTGGGGGTCT TCAGCAGCAC GCGCGAGGCG ATCGACAGCG GACGCTATCG CGGTGGTGCG
GTGGCGGTGG ATGGCGCATT GGGTGCACCA GCGGCGCTAC TGGCGGTGGC CGACGCTACG
CGGTTCAAGC CGGTGGAGAT CCAGTGGCGG CGCATCGGTG GTGAACTGTT TGCGGTGCTG
CTGGATGGAC AAGGCGATAC CCGCATCGTG TCCCAGGTTG AAGGGCGGTT GCAGGTTGCG
CGCGTGTTGC CCGCAGAGTG GCTGCAGCAG AAGGCAGGGG CGATGTCCGA CGTGCCGATG
CAGGGTTTCG CAGTCCAGCA AGCGCCGGAT GCGTACTTCT ATCCGCGTGC ACCGGAGGCC
ATGAATGGTG CGGCGGTGCG CCGCTTCCCG GTGGCAGTGG TGGACTTCGA CGATGCCGAG
GCGACGCGTG TCTATCTCGA TCTGGCCACC GGCGACCCGT TGCTGACGAT GGGGCATCGG
GAACGGGTGG GGCGCTGGCT GTTCTACTTC CTGCACAGCT GGGACCTACC GGCGATGTTG
CGCCAGGAAG GTGCCCGGCT GGCTGTGTTG CTGCTGCTGA GCGCTGCTGG CACGGCGTTG
TGCGCGACGG CCACGGTGAT CGGCTATCGC CGGTTGCGGA TGAAGGTGCG GCGGCGCTGA
 
Protein sequence
MSLRSTAKRW TYLVHRWLGI GGCLLMLLWF VSGLVMLFIG YPKLTPGERL AALPVLPEAH 
DLHGLSVLPA AVQAEPEAVA LTTLRGEPAY VVRAGSNVGA WSAVTGQALL PVSAQRAEAS
AAQFAGGPAF VGAMRVDEDR WTHSRALDAH RPLYRVEVGG AQPGDLYVSS RTGEVVLDAP
HVQQRWNYVG AWLHWLYFLR MQSVDPVWTW VVIVLSALCT VAAVSGIVVG VWRWRFRGHY
RSGAKTPYVE PWMRWHHLIG LVAAAFVFTW IFSGLMSMNP LGVFSSTREA IDSGRYRGGA
VAVDGALGAP AALLAVADAT RFKPVEIQWR RIGGELFAVL LDGQGDTRIV SQVEGRLQVA
RVLPAEWLQQ KAGAMSDVPM QGFAVQQAPD AYFYPRAPEA MNGAAVRRFP VAVVDFDDAE
ATRVYLDLAT GDPLLTMGHR ERVGRWLFYF LHSWDLPAML RQEGARLAVL LLLSAAGTAL
CATATVIGYR RLRMKVRRR