Gene Smal_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0878 
Symbol 
ID6478150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1025182 
End bp1026138 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID642730041 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_002027266 
Protein GI194364656 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TCTCGCCGTG GCAGCAGCGC GCGTTCGAAC AGACGGTCGC CGCGCTCGAT 
GCTGATCGGC TCGGCCATGG CCTGCTGATC TGTGGCCCGG CCGGACTGGG TAAGCGCGAG
GTGGCGTTGG CCCTTGCCGA CCATGTGCTG GCGCGCGGCG ATGCCGCGCA TGCCACGCGC
ACGCGCCAGC TGATCGCCGC CGGCACCCAT CCGGACCTGC AGCTGGTCAG CTTCATTCCG
AACAAGAGTG GCGACAAGCT GCGCACCGAG ATCGTCATCG AGCAGGTGCG CGAGATCACC
AACAAACTGG CGTTGACCCC GCAGTACGGC GTGGCGCAGG TGGTGATCGT CGACCCGGCC
GATGCCATCA ACCGTTCGGC GGCCAACGCG CTGCTGAAAA CACTGGAAGA GCCGCAGCCC
GGTCGCTACC TGTGGCTGAT AAGCAGCGAC CCGGCGCGCC TGCCGCAGAC CATCCGCAGT
CGCTGCCAGC GCCTGGAATT CAAGCTGCCG CCGCGTGAGG AAGCGCTGGC GTGGCTGCAG
CACCAAGGGC ACAGCGAAGC ATCCGCGCGC GAAGCCCTGG ACGCCGCGCG CGGCCATCCC
GGCCAGGCCG ACAACTGGCT GCGCGAAGAC GGCCTGAGCC TGCGCCGTGA GGTGGGCCGC
GAACTGGAGC AGCTGGCCGC CGGCAAGACC GGCGCGGTGG AGCTGGCGCA GAAGTGGTGC
GGTGATGACA ACGCGGCGCT GCGCCTGCGC TTTGCCGCCG ACCTGGCGCT GGCCCAGGCC
AGCACCGATG CCTTGACCAC GCCGGAGCGA TTGCACAAGC TTGCAGCCTG GTTCGATGCG
GCTAACCGCA CCCGCGACCT GCTGCGCACC ACGGTGCGTG CAGACCTTGC GGTGGTCGAG
TTGCTGCTGG CCTGGAACAA GGTGAACGAG CGGCCTGCCG CAAGGGGAAA TCGATGA
 
Protein sequence
MSTFSPWQQR AFEQTVAALD ADRLGHGLLI CGPAGLGKRE VALALADHVL ARGDAAHATR 
TRQLIAAGTH PDLQLVSFIP NKSGDKLRTE IVIEQVREIT NKLALTPQYG VAQVVIVDPA
DAINRSAANA LLKTLEEPQP GRYLWLISSD PARLPQTIRS RCQRLEFKLP PREEALAWLQ
HQGHSEASAR EALDAARGHP GQADNWLRED GLSLRREVGR ELEQLAAGKT GAVELAQKWC
GDDNAALRLR FAADLALAQA STDALTTPER LHKLAAWFDA ANRTRDLLRT TVRADLAVVE
LLLAWNKVNE RPAARGNR