Gene Smal_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0876 
Symbol 
ID6478148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1023462 
End bp1024523 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID642730039 
Productaminodeoxychorismate lyase 
Protein accessionYP_002027264 
Protein GI194364654 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAG CCAAGCGCGG GTGTCTGTTC GTGGTAACGC TGGTGGTGGT GCTGGCCGCC 
GTCGTGGCCG GCGCGGGCGC GTGGTTCTTC TACCAGCAGA CCCGGTTCGC CGACGCTCCG
ATCACCCCGT CCGCCGAAAG CGTGGTCATC GCCAGTGGCG ACGGCATGAA CACGGTGCTG
CGCAAGCTGC GCGACGCCGG CGTGGACGAG GGCCAGGACG CGCAGTGGCA GCTGCTGGCG
CGCCAGCTCG ATGCGGCCGG CAAACTGAAG GTGGGTGAGT ACGCGCTCAG CAACGACCTG
ACCCCGCGTG ATCTGCTGCT GCGCATGCGC GCCGGCAAGG TGCTGCAGCA CCGCGTCACG
ATCATTGAAG GCTGGAACAT CCGCCAGTTG CGTGCCGCGC TCAAGCGCGC CGAGCCGCTG
CTGCACACCA CCGACAACCT CGATGACGCC GCGTTGATGC AGCGCCTCGG CTTCGGTGGC
CAGCATCCGG AAGGTCGTTT CCTGCCGGAG ACCTATGTCT ACCAGCGCGG CGACAGTGAC
CTGGACGTGC TCAAGCGCGC CCACGGTGCG ATGGAGAAGG CACTGGACGA GGCGTGGGAA
AGTCGTGCGC CGGACCTGCC GATCAATACG CCCTACGAGC TGCTGACGAT GGCGTCGATC
ATCGAAAAGG AAACCGCGCT GGCCAGCGAG CGCCCGCAGA TTGCCGGGGT GTTCATGCGC
CGCCTGAAGA TCGGCATGCG CCTGCAGACC GACCCGACCG TGATCTACGG CATCGGCGCG
GCGTATGACG GCAACATCCG CCGCCGCGAC CTGACCACCG ATACGCCCTA CAACACCTAT
ACGCGTGCGG GCCTGACCCC GACCCCGATC GCCATGCCCA GCCGCGACGC GCTGATGGCG
GCCGCACAGC CGGCTGCGGG CGACGCGCTG TACTTCGTCG CGGTCGGCGA TGGCAGTGGC
GCGCATGTGT TCTCGCCCAG CCTGGACCAG CACAACGCCG CAGTGGCCCG CTACCTGCAG
CAGCTGCGCC AGCAACGCAC CAAGGAGACC CCGGCGCAAT GA
 
Protein sequence
MAGAKRGCLF VVTLVVVLAA VVAGAGAWFF YQQTRFADAP ITPSAESVVI ASGDGMNTVL 
RKLRDAGVDE GQDAQWQLLA RQLDAAGKLK VGEYALSNDL TPRDLLLRMR AGKVLQHRVT
IIEGWNIRQL RAALKRAEPL LHTTDNLDDA ALMQRLGFGG QHPEGRFLPE TYVYQRGDSD
LDVLKRAHGA MEKALDEAWE SRAPDLPINT PYELLTMASI IEKETALASE RPQIAGVFMR
RLKIGMRLQT DPTVIYGIGA AYDGNIRRRD LTTDTPYNTY TRAGLTPTPI AMPSRDALMA
AAQPAAGDAL YFVAVGDGSG AHVFSPSLDQ HNAAVARYLQ QLRQQRTKET PAQ