Gene Smal_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0860 
Symbol 
ID6478059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1007842 
End bp1008201 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content62% 
IMG OID642730023 
Producthistidine triad (HIT) protein 
Protein accessionYP_002027248 
Protein GI194364638 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AAACCCTCTT CAGCAAGATC ATCCGTCGCG AGATCCCGGC CACCATCGTC 
TACGAGGATG ACGAGGTGCT GGGCTTCAAG GACATCGCAC CGCAGGCGCC GGTGCACGTG
CTGTTCATTC CGAAGAACGA AATCATTCCG ACCCTGGACG ATCTGCAGCC GTCGCAGGCG
CACCTGATCG GCAAACTGGC ACTGGCCGCT GCCGAGTACG CGCGCCGCGA GGGTTTTGCG
CAGGATGGCT ATCGCATCGT GATGAACTGC CGCGAGGACG CCGGGCAGAC CGTGTTCCAT
ATCCACATGC ACCTGCTGGC CGGTGGGCAG CTGGGGCATT TCGGTACGCC GGGGCGTTGA
 
Protein sequence
MSNETLFSKI IRREIPATIV YEDDEVLGFK DIAPQAPVHV LFIPKNEIIP TLDDLQPSQA 
HLIGKLALAA AEYARREGFA QDGYRIVMNC REDAGQTVFH IHMHLLAGGQ LGHFGTPGR