Gene Smal_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0850 
Symbol 
ID6478047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp988630 
End bp989379 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID642730012 
Product3-deoxy-D-manno-octulosonic-acid kinase 
Protein accessionYP_002027238 
Protein GI194364628 
COG category[T] Signal transduction mechanisms 
COG ID[COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAT TCGACGCCAA TGAAGCGCTG ACGCCATGCC GCGAGGGTCG CGGCATCGGG 
GCCATTCTGT TCGACCGCGA GCGGCTGCGG CAAGCCGAGG CCGACCTGTT CTCGCCCCAG
CACTGGGGCA GCAAGGCCCG GCCGGTGGGC GAGGGTGGCC GTGGCAGCGC CTGGTTCATC
GATGCGCCGT TCGGTGCCAG CGTCCTGCGC CACTACCTGC GCGGCGGCCT GGCGGCGAAA
ATCAGCCATG ACCAGTACCT CTGGCGCGGC GCAGACCGGA CCCGCAGCTT CGCCGAATTC
CGGCTGATGC GCGCACTGCG CGAGAAGAAG CTGCCGGTAC CCCGGCCCCT GGCGGCGTTC
TACATGCGCG AGGGCCTGCG CTACCGGGCG GCGATCCTGA TGGAGCGGAT CGAGGGCGTG
CGTTCGCTGG CCGACCGCGC GCTGGTCGCC GGCCGTGGTG CGCCGTGGGA AGAGACGGGG
CGGTTGATCG CCCGCTTCCA CCGGGCCGGG CTGGATCATG CCGACCTCAA CGCGCACAAC
ATCCTGTTCG ATGGCAATGG CCATGGCTGG TTGATCGACT TCGACCGTGG GGTGATCCGC
ATTCCGGCCA CCGCCTGGCG CGAGCGTAAC CTGAAGCGCC TGCTGCGCTC GCTGATCAAG
CTGCGCGGCG AGCGTAGCGT GGAAGACGTG CAGAAGGACT ACGTGCGGCT GCGCCGCGCC
TATGACATGG CCTGGAACCG GGGCACCTGA
 
Protein sequence
MVAFDANEAL TPCREGRGIG AILFDRERLR QAEADLFSPQ HWGSKARPVG EGGRGSAWFI 
DAPFGASVLR HYLRGGLAAK ISHDQYLWRG ADRTRSFAEF RLMRALREKK LPVPRPLAAF
YMREGLRYRA AILMERIEGV RSLADRALVA GRGAPWEETG RLIARFHRAG LDHADLNAHN
ILFDGNGHGW LIDFDRGVIR IPATAWRERN LKRLLRSLIK LRGERSVEDV QKDYVRLRRA
YDMAWNRGT