Gene Smal_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0841 
Symbol 
ID6478037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp977660 
End bp978859 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID642730002 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002027229 
Protein GI194364619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCC GAAGTCTGCC GCTGGCCCTG GGGCTTGTCC TGGGGTTGGC CGGAACCGCG 
GGCGCGCAGT CGCTGGGCGC CGGCATCAGC CAGAACCTGA CCGCCGCTGC GGCGCTGCCG
CTGGATCCGT CCGCGCTGCC TGCGCCCTCG GTGCGCAATG GCCAGGAGAT CTTCACCAGC
TTCCGCGATG GCCTGGCCGA GCCCAGCTGC GATGCCGAGG CCACCAGCCC GCGCTGGCAG
AAGCAGTTCG CCCACGCGCC TTCCCGCCTG GCCAACCAGG ATGACGACGC ACTGGTGCTG
TTCGGTTACG TGGTTGAAGA ACTGCGCAAG GCCAACCTGC CCACCGAATT CGCCCTGATT
CCCTTCGTGG AAAGCGGCTA CCGGCCCAAT GCCCGCAACG GCAGCGGCCC GACCGGCCTG
TGGCAGTTCA TCGCCACCAC CGCACGCAAC CATCGCGTGC CGATGGCCAA CGGCTATGAC
GGCCGCCTCT CGGCGGTCGA TTCGACCCAG GCCGCGGTGC GTTACCTCAA GACCCTGCAC
GGCATGTTCG GTGGCGACTG GCGCCTGGCC ACCATGGCCT ATAACGCCGG CGAGTACCGC
GTGCTGCAGT CGCTGCGCAA GGCTGGCATG AATGCGCAGA ACGCCAAGCC ATCGGCGCTG
CCCGGCCTGT CGCCGGTCAC CTATGCCTAC GTCGAGAAGC TGCATGCCCT GGCCTGCGTG
CTGGAAGACG TGGAAGACCA GCCCCGCGTG ATGGCCTCGC TGGACCGCAC CGTGCCGGTA
CTGAAGGACC ACACCCTGCC GGCCGGCACC AGCGTGCAGC AGTGGGCCTC ACAGCGTGCC
CTGGACCCGG CCAGGATCGC CCGCCTCAAT CCCGCCCTGG CAGGCGGTGG CCGCGCCTCC
GGCACCACCC GCGTGCTGGC GCCGGTCTCG GCCGCCAATG CGACAGTGGC AGAGACTGCC
ACCGCGCTGG TCGCCAGCGC CGCGCCGGTC GCCGCAGCCG CGCCGACACC GCAGGTGGCC
AAGACCGTCG CGGCCATCGC CGACCGTCCG CGCAGCCGTC GCCACACCGT GCGGAATGGC
GAGTCGGCCT GGACCATCGC CCGCCGCTAC GGCATGCCGG TCAAGGCCCT GCTGTCGCTG
AACGGCCTGA GCGGCAGCAG CGTGCTGAAG CCGGGCGCGG TACTGCGCGT CGAAGACTGA
 
Protein sequence
MMRRSLPLAL GLVLGLAGTA GAQSLGAGIS QNLTAAAALP LDPSALPAPS VRNGQEIFTS 
FRDGLAEPSC DAEATSPRWQ KQFAHAPSRL ANQDDDALVL FGYVVEELRK ANLPTEFALI
PFVESGYRPN ARNGSGPTGL WQFIATTARN HRVPMANGYD GRLSAVDSTQ AAVRYLKTLH
GMFGGDWRLA TMAYNAGEYR VLQSLRKAGM NAQNAKPSAL PGLSPVTYAY VEKLHALACV
LEDVEDQPRV MASLDRTVPV LKDHTLPAGT SVQQWASQRA LDPARIARLN PALAGGGRAS
GTTRVLAPVS AANATVAETA TALVASAAPV AAAAPTPQVA KTVAAIADRP RSRRHTVRNG
ESAWTIARRY GMPVKALLSL NGLSGSSVLK PGAVLRVED