| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0790 |
|---|
| Symbol | |
|---|
| ID | 6477893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 912029 |
|---|
| End bp | 913015 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642729940 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_002027178 |
|---|
| Protein GI | 194364568 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.108388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0782545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC CCGTTCGTGT TGCCGTGACC GGCGCCGCCG GCCAGATCGG TTATGCCCTG
CTGTTCCGCA TCGCCTCCGG CGAAATGCTG GGCAAGGACC AGCCGGTCAT CCTGCAGCTG
CTGGAACTGC CGGTCGACAA GGCCCAGGCC GCCCTGAAGG GCGTGATGAT GGAACTGGAA
GACTGCGCCT TCCCGCTGCT GGCCGGCATG GTCGGCACCG ACGACGCCGA AGTGGCCTTC
AAGGACGCCG ACATCGCCCT GCTGGTCGGC GCGCGTCCGC GCGGCCCGGG CATGGAGCGC
AAGGACCTGC TGCTGGAAAA CGCCAAGATC TTCACCGCTC AGGGCGCGGC GCTGAACAAG
GTCGCCAGCC GTGACGTGAA GGTGCTGGTG GTCGGCAACC CGGCCAACAC CAACGCCTAC
ATCGCGATGA AGTCGGCCCC GGACCTGAAG CCGGAGAACT TCACCGCCAT GCTGCGCCTG
GACCACAACC GCGCCCTGAG CCAGCTGTCG GCCAAGCTCG GCAAGCCGGT CGGTGGCATG
GAGAAGCTGG TCGTGTGGGG CAACCACAGC CCGACGATGT ACCCGGACTA CCGTTTCGCC
ACCGCCGATG GTGCGTCGAT CGCCGATGCG ATCAACGACC AGGAGTGGAA CGCCAACACC
TTCATCCCGA CCGTCGGCAA GCGCGGCGCG GCGATCATCG AAGCCCGTGG CTCGTCCTCG
GCGGCTTCGG CGGCCAACGC AGCCATCGAC CACGTGCGTG ACTGGGTGCT GGGCAGCAAC
GGCAAGTGGG TCACCATGGG CGTGCCGTCC GACGGTTCCT ATGGCATTCC GGAAGGCGTG
ATCTTCGGCT TCGCGGTGAC CACCGAGAAC GGCAAGTACA CCCTGGTCAA GGATCTGCCG
GTCGACGACT TCAGCCAGAA GTACATCGAC AAGACCCTGG CCGAGCTGGA AGAAGAGCGC
TCCGGCGTCG CCCACCTGCT GGGTTGA
|
|---|
| Protein sequence | MKAPVRVAVT GAAGQIGYAL LFRIASGEML GKDQPVILQL LELPVDKAQA ALKGVMMELE
DCAFPLLAGM VGTDDAEVAF KDADIALLVG ARPRGPGMER KDLLLENAKI FTAQGAALNK
VASRDVKVLV VGNPANTNAY IAMKSAPDLK PENFTAMLRL DHNRALSQLS AKLGKPVGGM
EKLVVWGNHS PTMYPDYRFA TADGASIADA INDQEWNANT FIPTVGKRGA AIIEARGSSS
AASAANAAID HVRDWVLGSN GKWVTMGVPS DGSYGIPEGV IFGFAVTTEN GKYTLVKDLP
VDDFSQKYID KTLAELEEER SGVAHLLG
|
|---|
| |