| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0787 |
|---|
| Symbol | |
|---|
| ID | 6477890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 908853 |
|---|
| End bp | 909320 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642729937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002027175 |
|---|
| Protein GI | 194364565 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.426334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0385246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAGA GCGGCTACAA CCCGGATCCA CACCGGCATC CGGGTCTGCA CGTCATCGCC
TTGCTCGAAG CGAGCAAGGC GATGCTGGCG CTGTTGGCCG CCACCGGGCT GGAAGTGCTC
GGACCGCAGC CGCTGCGGCA CGGCATCATG GCCCTGATCC GGCGCTTCAG CTTGGATCCG
GACCATGGCA CCCTGCCCTC GCTGCTGCAC ATGATCAGCC CCGACGCGGT GCACCTGGCC
GCGGCGGGGA TGATCGGTTA CGGCCTGCTG CACCTGGTCG AAGCCTGGGG CCTGTGGCGT
GCCAAGGCCT GGGCCTCCTG GCTGGGCTGC CTGACCGCTT CGCTGTACCT GCCGTTCGAT
ATCTTCGCGA TCATCCGCCA CCCTGGCTGG CCCTCGTGGA CGATCCTGGC GATCAACCTG
ATCGTGGTCT ACGTGCTGGC CCGCGACCTG CGCAAGCGCC GCCGCTGA
|
|---|
| Protein sequence | MNQSGYNPDP HRHPGLHVIA LLEASKAMLA LLAATGLEVL GPQPLRHGIM ALIRRFSLDP
DHGTLPSLLH MISPDAVHLA AAGMIGYGLL HLVEAWGLWR AKAWASWLGC LTASLYLPFD
IFAIIRHPGW PSWTILAINL IVVYVLARDL RKRRR
|
|---|
| |