| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0779 |
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| Symbol | rpsD |
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| ID | 6477882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 898299 |
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| End bp | 898928 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642729929 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_002027167 |
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| Protein GI | 194364557 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0600575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ATATCGGTCC TACCTGTAAG CTCGCCCGTC GCGAAGGCGC CGACCTGTCC
CTGAAGAGCC CGGCGCGTGC GCTGGACTCC AAGTGCAAGC TGGAGCAGAA GCCCGGCCAG
CACGGCGCCA CTGCCCGTAA GGGCAAGCTG TCCGACTACG CCACCCAGCT GCGTGAAAAG
CAGAAGGTCA AGCGTATCTA CGGCCTGCTG GAGCGTCAGT TCCGCAACTA CTACAAGAAG
GCCTCGACCA AGAAGGGCAA CACCGGCGAG AACCTCCTGC AGCTGCTGGA AACCCGCCTG
GACAACGTCG TCTACCGCAT GGGCTTCGCC GTGACCCGTC CGGCTGCCCG TCAGCTGGTG
TCGCACCGCG GCGTCACCGT GAATGGCAAG TCGGTCAACC TGGCTTCGTA CCAGGTCAAG
GCTGGCGACG CCATCGCCCT GTCTGAAAAG GCTGCCAAGC AGCTGCGCGT CCAGGAAGCC
CTGACCGTCG CCGCCCAGCA TGACCTGAGC CCGTCGTGGG TTGAAGTGGA TTCCGGTAAG
TTCACCGGCA TCTTCAAGGC TGTTCCGGAT CGTTCGGATC TGCCTGCGGA CATCAACGAA
GCGCTGATCG TCGAGCTGTA TTCGAAGTAA
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| Protein sequence | MARYIGPTCK LARREGADLS LKSPARALDS KCKLEQKPGQ HGATARKGKL SDYATQLREK
QKVKRIYGLL ERQFRNYYKK ASTKKGNTGE NLLQLLETRL DNVVYRMGFA VTRPAARQLV
SHRGVTVNGK SVNLASYQVK AGDAIALSEK AAKQLRVQEA LTVAAQHDLS PSWVEVDSGK
FTGIFKAVPD RSDLPADINE ALIVELYSK
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