Gene Smal_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0768 
SymbolrplE 
ID6477871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp891958 
End bp892500 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID642729918 
Product50S ribosomal protein L5 
Protein accessionYP_002027156 
Protein GI194364546 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0251429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0345896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCC GTCTCGAAAA GTTTTACAAG GAAGAAGTGG TGCCGGCGCT GATGAAGCAG 
TTCGGCTACA CCAATCCGAT GGAAGTGCCG AAGCTGGTCA AGGTCACCCT GAACATGGGT
GTCGGCGAAG CGGCCACCAA CAAGAAGATC CTGGAAAACG CCGTCGGCGA CATGACCAAG
ATTTCCGGCC AGAAGCCGGT TGTCACCAAG TCGCGTATCT CGGTTGCGTC GTTCAAGATT
CGTGATGGTT GGCCGATCGG CTGCAAGACC ACGCTGCGTC GCCACAAGAT GTACGAGTTC
CTGGACCGCC TGATCAACAT CTCGCTGCCG CGCGTGCGCG ACTTCCGTGG TGTTTCCGGT
CGTTCCTTCG ACGGTCGCGG CAACTTCAAC ATGGGTGTGA AGGAACAGAT CATCTTCCCG
GAAATCGACT TCGACGCTGT CGACGCGATC CGCGGCATGG ATATCGCCAT CACCACCACT
GCGAAGACCG ACGCGGAAGC GAAGGCGCTG CTGGCAGCGT TCAAGTTCCC GTTCCGTAAC
TGA
 
Protein sequence
MTSRLEKFYK EEVVPALMKQ FGYTNPMEVP KLVKVTLNMG VGEAATNKKI LENAVGDMTK 
ISGQKPVVTK SRISVASFKI RDGWPIGCKT TLRRHKMYEF LDRLINISLP RVRDFRGVSG
RSFDGRGNFN MGVKEQIIFP EIDFDAVDAI RGMDIAITTT AKTDAEAKAL LAAFKFPFRN