Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0747 |
Symbol | rplJ |
ID | 6477850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 871446 |
End bp | 871982 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642729897 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_002027135 |
Protein GI | 194364525 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0329012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.965103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTCA ATCTGTCCCA GAAGCAAGAA GTAGTCGCCG AGCTGGCAGA CATCGCCGCC AAGGCCCACT CCTTGATCGC AGCCGAATAC GCTGGCACCA CGGTCGCCCA GATGACCGCG ATGCGCAAGC AGGCTCGTGA AACCGGTGTT TTCTTGAAAG TTGTCAAGAA CACCCTGGCT TCGCGCGCCG TTGAAGGCAC CGAGTTCGCA GTCGCCCAGG ACCAGATGGT TGGTCCGCTG CTGTACGCGT TCTCGCTTGA GGAGCCCGGC GCAGCCGGTC GCCTGATCAA GGAAGCTGCC AAGGGCAACG ACAAGCTGAA GGCTAAGGTC GTCGCCATCG GTGGTGAAGT GTTCCCGGCA AGCCATGTCG ACGTGCTGGC CTCGCTGCCG ACCCGCGACC AGGCCCTGGC AATGCTGGCC CGCGTCCTGA CCGAGCCGGT CACGATGTTC GCCCGCGCCA TCAAGGCAAT CGGCGACAAG CAGAATGGTG GCGACGTCGC CGCCGACGCT GCTGAGCCGG CCGCCGAGAC CGCCTGA
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Protein sequence | MALNLSQKQE VVAELADIAA KAHSLIAAEY AGTTVAQMTA MRKQARETGV FLKVVKNTLA SRAVEGTEFA VAQDQMVGPL LYAFSLEEPG AAGRLIKEAA KGNDKLKAKV VAIGGEVFPA SHVDVLASLP TRDQALAMLA RVLTEPVTMF ARAIKAIGDK QNGGDVAADA AEPAAETA
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