| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0723 |
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| Symbol | |
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| ID | 6477751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 840707 |
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| End bp | 842401 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642729868 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002027111 |
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| Protein GI | 194364501 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.686717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.618233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA TGCCCGCATT GATTCGCATC CCCAGTGTTC TGCTGCTGTC CCTGGCCTGC
GGCCAGGCCC TGGCGGCGGT GCCGGCCAAG GCCCCCGTGC GGGCCCCGGC CACTGAGGAA
CTGGCACTGG AACCGGTGAT GGCCGGTGAA TTCGCGCTGC AGGCCGGCAA GCTGGCCGAG
GCCGCGCGCT GGTACCTGCA GGCCGCCCAG CAGACCGACG GCGACGCCGG CCTGGCCGAG
CGTGCGACCC GTATTTCCAT GCTTGCCAAC GATGATGCCA GCGCGGCAAA GGGCCTGGCC
CTGTGGCAGC AGCGCGCCCC GCGTTCGTTG ACCATGCGCA GTGCGGCCGG TGCGCTGGCC
ATGCGCCAGG GCGATGTGAA GGCGGCCCGC ACCGAACTGC AGGGCCTGCT GGCCGACCCC
GACGAGCGCG GCTGGAAGTT CGCCCTGGCC GCACTGATCG GTGGCGGCCG TGATCCGGCG
GTGCCCGCGC AGGTGCTGGG TGAGCTGGTC GACGCCAATG CCATTCCGCC GAAGATCGAA
GCCTGGCAGG AGTTTGGCCG CCTTGCCCTG CGCATGGAAA AGCCCGAGCT GGCCCGGCGC
ATGATCGATG AAGTGGTCAA GCGCTTCCCG GAAGAGCCAC GTGTGGCGCT GCTGCGTGCC
AGCCAGCTGC AGCAGGCGGG CGAGACCGGC AAGGCGTTGT CGCTGCTGCA CGATGTGGAG
CCGAAGACCC GCCAGGACCC GGAACTGCGC AATGCGGTGG CCATTGCCTA CGACAGTCTC
GGCCAGCCGT CCGCCGCCGA GCGCGTGCTG GCGTTCGGCC CGCAGGACGT GCAGACCTGG
GGCATGCGCG CCTCGCTGCT GGCCAAGCAG GGCGACAAGG CCGCGCTTTC CAATCTCTAC
AACGAACTGT CGCGGCAGGC GGCCAAGCCG GACCCGGCGC AGCGCCTGCT GCTGGGCAAG
ATCGCCGAGT ACCTGAAGCG TTATCCCGAG GCGGTGCAGT GGTACCACAG CGTGCCCGGT
GGCGATGAGC TGAGCGAGGC GCGCCTGCGC GCGGCCAATG CCCAGGCCCT GGCCGGGCGT
CTGCCACTGG CGCTGGACGA AGTGCATGCG ATCCAGTCCG ATGCGGTGGT CGACGACGAC
GTGCGCCGCG ACGCCTACCT GCTGGAAGCC GAGCTGCGCC AGCGCGCCGA CGACAGTGCC
GGCGAGCTGG ATGCGCTGGC CCGCGGCCTG GCGGCCTACC CGGATGACAA CGGCCTGCTG
TACGCCCGTG CGCTTACCTG GGAGCGTCGC GACGACATTC CGCGTGCCGA GGCCGATCTG
CGCAAGATCC TGGTGACCGA GCCGGAGAAC GTGCCGGCTT TGAACGCGCT GGGTTACACC
CTGGCCGATC GCACCGGCCG CCTGCAGGAA GCACTGGAGC TGATCGACCG CGCCCGCGTG
GCCGAACCGG ACAACGCCGC CATCGTCGAC AGCTACGGCT GGGTGCTGTA TCGCCTGGGC
CGCAAGGAAG AGGCACTGGT GCAGCTGCGC CGGGCCTGGA CCCTGGCCAA GGACCCGGAG
ATCGCTTCGC ACGTTGGCGA AGTGCTGTGG GTGCTGGGCA AGCACGATGA GGCCCGTCAT
TTCTTCGAGG AAGCGGCCAA GCTCGACCCT GAAAACCGCG CGCTGCTGCG CGCCCGCGAG
AAATTCAATC CATGA
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| Protein sequence | MPTMPALIRI PSVLLLSLAC GQALAAVPAK APVRAPATEE LALEPVMAGE FALQAGKLAE
AARWYLQAAQ QTDGDAGLAE RATRISMLAN DDASAAKGLA LWQQRAPRSL TMRSAAGALA
MRQGDVKAAR TELQGLLADP DERGWKFALA ALIGGGRDPA VPAQVLGELV DANAIPPKIE
AWQEFGRLAL RMEKPELARR MIDEVVKRFP EEPRVALLRA SQLQQAGETG KALSLLHDVE
PKTRQDPELR NAVAIAYDSL GQPSAAERVL AFGPQDVQTW GMRASLLAKQ GDKAALSNLY
NELSRQAAKP DPAQRLLLGK IAEYLKRYPE AVQWYHSVPG GDELSEARLR AANAQALAGR
LPLALDEVHA IQSDAVVDDD VRRDAYLLEA ELRQRADDSA GELDALARGL AAYPDDNGLL
YARALTWERR DDIPRAEADL RKILVTEPEN VPALNALGYT LADRTGRLQE ALELIDRARV
AEPDNAAIVD SYGWVLYRLG RKEEALVQLR RAWTLAKDPE IASHVGEVLW VLGKHDEARH
FFEEAAKLDP ENRALLRARE KFNP
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