Gene Smal_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0721 
SymbolprfA 
ID6477749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp838309 
End bp839391 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID642729866 
Productpeptide chain release factor 1 
Protein accessionYP_002027109 
Protein GI194364499 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.508699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGA CCCTGCGCCG TAAGCTGGAA GCGCTGGCCG AGCGCCGCGA AGAACTGGAA 
CGCCTGCTCG CCGAACCCGA TGTGGTCGCC GACAACACCC GTTTCCGCGA CCTTTCGCGC
GAATTCGCCC AACTTGAGCC GATCGCCACC GCCCTGGCCG ATGAAACCCG TGCCAAGGCC
GACCTGGCCG CGGCCGAAGG CATGCGTGCC GACCCCGACC TGCGCGAGCT GGCCGACGAG
GAAATCGCGG CCGCGCAGGC GCGCCTGCAG GAGCTGGAGC AGGAACTGGC ATTGCTGCTG
GTGCCGCGCG ACCCACGCGA CGACGGCAAC CTGTTCCTGG AAGTGCGTGC CGGTACCGGT
GGCGACGAAG CAGCGATCTT CGCCGGCGAC CTGTTCCGCA TGTACGCCCG CTATGCCGAA
CGCCAGGGCT GGAAGGTCGA GATCGAATCG GACAACCCCG GCGAACATGG CGGCTACAAG
GAAGTGGTGG CGCGCGTGGT CGGCCGTGGT GCGTTCTCAC GCCTGAAATT CGAATCGGGC
ACGCATCGCG TACAGCGTGT TCCGGCTACC GAATCGCAGG GCCGCATCCA CACCTCGGCG
GCGACCGTGG CGATCATTCC CGAGGCCGAT GAAGTCGATG ACATCGTCAT CAATCCGGCC
GACCTGAGGG TGGATACGTT CCGCTCGTCC GGCGCCGGTG GCCAGCACGT CAACAAGACC
GAGTCGGCCA TCCGCATCAC CCACGTGCCA ACCGGTGTGG TGGTGGAATG CCAGACCGAG
CGCAGCCAAC ACGCCAACCG CGACAAGGCG ATGAAGCGCC TGAAGGCGCA GCTGCTGGAC
GCCGAGCGCC AGCGCCAGGA CGCCGCGCAG GCCGAGTCGC GTCGCCTGCA GGTCGGCAGC
GGCGACCGCA GCCAGCGCAT CCGCACCTAC AACTTCCCGC AGGGCCGGAT CACCGACCAC
CGCGTGGAAG GCCTGACCCT GTATGACCTG CCGAACATCC TCGCCGGCGA TCTCGATCCG
CTGCTGCAGC GGCTCAGCCA CGAACACCAG GTCGACGCCC TGGCCCAGCT GTCGGCGGGC
TGA
 
Protein sequence
MTPTLRRKLE ALAERREELE RLLAEPDVVA DNTRFRDLSR EFAQLEPIAT ALADETRAKA 
DLAAAEGMRA DPDLRELADE EIAAAQARLQ ELEQELALLL VPRDPRDDGN LFLEVRAGTG
GDEAAIFAGD LFRMYARYAE RQGWKVEIES DNPGEHGGYK EVVARVVGRG AFSRLKFESG
THRVQRVPAT ESQGRIHTSA ATVAIIPEAD EVDDIVINPA DLRVDTFRSS GAGGQHVNKT
ESAIRITHVP TGVVVECQTE RSQHANRDKA MKRLKAQLLD AERQRQDAAQ AESRRLQVGS
GDRSQRIRTY NFPQGRITDH RVEGLTLYDL PNILAGDLDP LLQRLSHEHQ VDALAQLSAG