Gene Smal_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0716 
Symbolrbn 
ID6477744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp832260 
End bp833534 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID642729861 
Productribonuclease BN/unknown domain fusion protein 
Protein accessionYP_002027104 
Protein GI194364494 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0603481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.710607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTT TGGATACGCT CAACCTGTGG ATGGAGCGCG CGCGGGATCG CGCACGCGCC 
ATCAGCTTCG GCCGCTTCCT GTGGCATCGC TTCCTCGACG ACCGCCTGTT CCAGGCAGCG
GCGGCGCTGG CGTACACCAC GGTGTTCGCG TTGGTGCCGC TGGCGATCGT GGTGTTCGGC
GTGCTCTCGG CCTTCCCCGT CTTCGACCGC TGGAGCGACC AGCTCAGCGA TTACGTCTTC
TCCAACTTCG TGCCCAACGC CGCGCGCGCC GCCGAGGGCT ACCTGCGGCA GTTCTCGGCC
AGTGCCGGTC AGCTCACCGC CGCCGGCTTC ATCGCACTGG TGGTCTCGTT GCTGATCACC
CTCAACAGCG TCGAAGAGAC CTTCAACCAG ATCTGGCGGG TCGGCTCGAC CCGGCCCAAG
CTGACCCGCT TCCTGGTCTA CTGGACCGTA CTGACCCTGG GCGCGATGCT TGCCGCGGCC
TCGCTGGCAG TGTCGGCGCG GGTCTTTGCG ATGCCATTGT TCGGCACCCA GGAGGGCCGT
TGGCTGGCCG ACCTGGCGCT GCGGCTGGCG CCGATCCTGA TCGAATTCGT CTGCATCACG
CTGATGTTCC GGGTGGTGCC GCACCACACG GTGAAATGGC GGCATGCGGT GCCCGGTGCG
ATCCTCGCCG CAGTCATCCT CGAACTGGTG AAGTGGGGCA TTGGTGCTTA CCTGGGCAGC
TTCCAGTCCT ATCAGAAGCT CTATGGCACG GTGGCCTTCG TGCCGATCCT GCTGCTGTGG
ATCTATCTGT GCTGGGTGGC GGTGCTGCTG GGCGCGTCGT TGTCCTCGTC GATGGCAGCG
TTCCGGTACC AGCCGGTCGA GCTGCGCCTG CCGCAGGGCT ACGAGTTCTA CGGCCTGCTG
CGCCTGCTGG GACGCTTCCA CCATGCACGC GCGAAGGGCA AAGGCCTGGC CGACGACGAG
ATCCTGCGGC TGGAGCCGAT GCTGACCGAT TCGCTGCTGC AGGACCTGGC CTGCAACCTG
CAGGAAATCG GCCTGCTGCG CCGTGATGAG CGCGGTGAAT GGCTGCTCGC GCGCGATCTG
GAGCAGGTCA GCCTGTCTGA TCTGTACGAA TGCACCCAGC TGCGCATTCC AGTGGCCGAG
CAGCACCTGC CGTACCGCGA CGACACCCTG GGCCGCGTCG CACTGGCGGC CCTGGACGAC
CTGCGACTGC CCCTGCGCGA GCGCCTCAAG CGCAAGGTCA GCGACATCTA CACCGATTCT
GGAGACACGC CATGA
 
Protein sequence
MEPLDTLNLW MERARDRARA ISFGRFLWHR FLDDRLFQAA AALAYTTVFA LVPLAIVVFG 
VLSAFPVFDR WSDQLSDYVF SNFVPNAARA AEGYLRQFSA SAGQLTAAGF IALVVSLLIT
LNSVEETFNQ IWRVGSTRPK LTRFLVYWTV LTLGAMLAAA SLAVSARVFA MPLFGTQEGR
WLADLALRLA PILIEFVCIT LMFRVVPHHT VKWRHAVPGA ILAAVILELV KWGIGAYLGS
FQSYQKLYGT VAFVPILLLW IYLCWVAVLL GASLSSSMAA FRYQPVELRL PQGYEFYGLL
RLLGRFHHAR AKGKGLADDE ILRLEPMLTD SLLQDLACNL QEIGLLRRDE RGEWLLARDL
EQVSLSDLYE CTQLRIPVAE QHLPYRDDTL GRVALAALDD LRLPLRERLK RKVSDIYTDS
GDTP