| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0641 |
|---|
| Symbol | |
|---|
| ID | 6477587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 759769 |
|---|
| End bp | 760734 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642729786 |
|---|
| Product | Ribokinase |
|---|
| Protein accession | YP_002027029 |
|---|
| Protein GI | 194364419 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.549657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.680229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA GTGTCGTTGT CGTCGGTTCC TTCAATGTCG ATCACGTGTG GCGGTGCGAG
TCGCTGCCGG CACCGGGTGC GACCATTGCC GGCCGCTACA GCACCGGCCC CGGTGGCAAG
GGCTTCAACC AGGCCGTGGC GGCCTGCCGC GCCGGTGCCG ACACGCACTT CGTGTGCGCG
TTGGGCGATG ACGCCGGTGG CGCCACCGCC CGCGAGCTGG CCGCACAGGA TGGCTTCGGG
CTGATCGCCG AAGCCAGCAG CGAACCGACT GGCACCGCTG GTATCTACGT GGATGCCCGT
GGCCGCAACA CCATCGTGAT CGGCCCGGGT GCCAACGCCG CACTGAGCAC CGACTTCCTG
CAACAGCAGC ACGCGCTGCT GGCCGGCGCC AAGGTGGTGC TGGTGCAGCT GGAATCGCCG
GTACAGACCA TCGAAGCAGC GCTGGCCACG GCCCGCGAAG CCGGCGTCAC CACGGTGCTC
AACACCGCAC CGGCCGACGC TCCCTCGACC ATCGGCCTGC TCAAGCTGGC CGATGTGATC
ACCCCGAACG AGACCGAGTT CGCCGCCCTG CTCGGCCGCC ATGTCGGTGA GCGCGTGGAT
GCCAACGACG TCGCCGCGCT GGATGGCGCC AGCCTGCATG CGCTGTGCCG CAAGCTGGTC
GGCAACGGTA CGGTGGTGGT GACCCTGGGT TCGGTGGGCG TGTTCGTGTC GCATGCCGAC
GAGAACCTGC GCGGCGATAC CCAGCCGTAC TACCGCGTGG GTGCCGAACA GGTGCAGGCG
ATCGACACCA CCGGTGCCGG TGACGCCTTC AATGGCGCGC TGGCCGCGTC GCTGGCGCAG
GTGGCCGATG CCCCGTTCGC CCGCCACGTG CGCTTCGCCA ACCAGTTCGC CGGTCGCTCG
ACCGAGAAGG AAGGCGCTGC TGCGGCGATG CCGCGCTTCA CCCCGGCTGA TTCCGAAGCA
AAGTAG
|
|---|
| Protein sequence | MSSSVVVVGS FNVDHVWRCE SLPAPGATIA GRYSTGPGGK GFNQAVAACR AGADTHFVCA
LGDDAGGATA RELAAQDGFG LIAEASSEPT GTAGIYVDAR GRNTIVIGPG ANAALSTDFL
QQQHALLAGA KVVLVQLESP VQTIEAALAT AREAGVTTVL NTAPADAPST IGLLKLADVI
TPNETEFAAL LGRHVGERVD ANDVAALDGA SLHALCRKLV GNGTVVVTLG SVGVFVSHAD
ENLRGDTQPY YRVGAEQVQA IDTTGAGDAF NGALAASLAQ VADAPFARHV RFANQFAGRS
TEKEGAAAAM PRFTPADSEA K
|
|---|
| |