Gene Smal_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0621 
Symbol 
ID6477567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp734638 
End bp735768 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID642729766 
ProductThiJ/PfpI domain protein 
Protein accessionYP_002027009 
Protein GI194364399 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.121561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT TCCCTCCCCT GCTGCTGGCC TGCGTGATGG CCATCCTCCA CGGACCCGTG 
GTCGCCTCAA CCGCCGATCC CACACAGCCA CCGCGCGTGC TGCTGGTCGT CAGCAGCGAA
GGTCGCGATC AGGGCCGTAT CCGACCAGGC TTCGAGATGG ACGAGTTCGC CCAGGCCTGG
CTGATACTTC GGCGCAACGG CTTCGAAATC GATGTGGCCA GCCCACGCGG CGGCGCCGTG
GAAGCCGACA AGTACAACGC CGCGGAACCC TTCAACGCTG CGGTTCTGGC TGATCCCCTG
GCCGTCCGCG CACTGGCCGC TACGCTGCCA ACGGCGCAAC TGCGGGCAGG CGACTATCGC
GGCGTGCTGG TGATCGGCGG CAAGGGCGCC ATGTTCGATC TGCCGGCTGA CAGCGCGCTG
CAGCGCACGA TTGCCACCAT ATGGGAACAA GGCGGCGTAG TCGCAGCGGT CTGTCATGGT
CCGGCGGCGC TGGCAGGCAT CCGCCTTGGC AATGGTCGCG CACTGGTGGA AGGCCGCTCC
ATGACCGGTT TCAGCGAGGA GGAGGAGGCA CTGTTCGGCA AGCGCTGGGC GAAGGAATTT
GCCTTCCAGC TGGAGCCACG CATGCGTGAA CTCGGGGCCC GTTGGCAGGA AGCGCCACTG
ATGATGCCAA AGGTGGTGGT GGATGGACGC CTCGTAACCG GACAGAATCC TTATTCCACT
CCCGTGCTGG CCGAGGCCTT CGTGCGTGCC AGCGGACAGG TACCGGTGGC CCGTGAACCC
TGGCGCGACG AGCGCAGCAT GGCGCTGGTG GAGCGGCACC TGAAGCTGCG CGACGAGCAG
GCCGTCCAGC AGCTGGCTCG GCACCCCGTG GATTACCACG TCGAACTGAT CGGCATCCTT
GGCTTCTACC AGCTGCAGGC TGCACAGACG CCGGCAGCGA TCGCCGATGC GTTGGCGATC
ATGCAGTTGG CCCGTCCACA CATGGACGAA CCGCGCCTCG ACGTGGCGAT GGCCGAAGCG
CACTGGCGTC TGGGCGATGC CACGCACGCC CGCACGCAAC TGCAGGCCGT GCTGGAAAAA
CAACCTGCAC TGGAAGAAGC TAAGGCACTT CTGGCCCGCA TGCAGCCTTG A
 
Protein sequence
MNRFPPLLLA CVMAILHGPV VASTADPTQP PRVLLVVSSE GRDQGRIRPG FEMDEFAQAW 
LILRRNGFEI DVASPRGGAV EADKYNAAEP FNAAVLADPL AVRALAATLP TAQLRAGDYR
GVLVIGGKGA MFDLPADSAL QRTIATIWEQ GGVVAAVCHG PAALAGIRLG NGRALVEGRS
MTGFSEEEEA LFGKRWAKEF AFQLEPRMRE LGARWQEAPL MMPKVVVDGR LVTGQNPYST
PVLAEAFVRA SGQVPVAREP WRDERSMALV ERHLKLRDEQ AVQQLARHPV DYHVELIGIL
GFYQLQAAQT PAAIADALAI MQLARPHMDE PRLDVAMAEA HWRLGDATHA RTQLQAVLEK
QPALEEAKAL LARMQP