| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0604 |
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| Symbol | ddl |
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| ID | 6477550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 715431 |
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| End bp | 716393 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642729749 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002026992 |
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| Protein GI | 194364382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGCGC TGACCTTCCC GCCGCTGCGA GTGACCGACC CGGCCGTGTT CGGCCGCGTC
GCCGTGCTGC TGGGCGGCAG CTCCAGCGAA CGCGAGGTGT CGCTGGACTC CGGCCGCAAC
GTGCTCGAAG CCCTGCAGTC GCGTGGCGTC GATGCGTTCG CCGTGGACGG CATCCCGGCG
CTGGCCAAGG CGCTCGCCGC CGGTGGCATC GATCGCGTGT TCAACATCCT GCACGGCCAC
AACGGTGGCG GTGAGGACGG CATCGTGCAG GGCCTGATGG ACGCCTTCGG CGTGCCGTAT
ACCGGCTCGA ACGTGCTGGG TTCGGCGCTG AGCATGGACA AGATCCGCAC CAAGCAGGTG
TGGCTGTCGC TGGGCCTGCC GACCCCGCAG TACCGCAAGG TCACTGCCGA GGACGTGCAC
GCCAATGCCG CCGCGCTGGG CTTGCCGGTG GTGGTGAAGC CGGCCAACGA AGGCTCCAGC
GTGGGCATCA GCCGGGTCAC CGATGACGCC GGCCTGGACG AAGCGGTGGC CCTGGCCGCG
CGCTACGACG GCCAGCTGCT GATGGAACAG ATGGTGATCG GCGACGAACT GACCGTGGCC
ATCCTCGGCG ATGTCGCGCT GCCGTCGATC CGCATCGTGC CCAAGGGCCA GTGGTACGAC
TACAACGCCA AGTACATCGC CGAAGACACC CAGTACCTGT GCCCGGGCCT GGACGGGGAT
GCCGAAGATG AAATCCGCCG CATTGCGCTG GCTGCATTCC GTGCTGCCGG CTGCCGTGGC
TGGGGCCGCG TGGACGTGAT GCGCGACCGC GACAGCGGCC GCTTCTTCCT GCTGGAAGTG
AACACCGCGC CGGGCATGAC CAGCCATTCG CTGGTGCCCA AGGCCGCACG CCAGGCCGGC
ATCGGTTTCG AGGAACTGGT GTGGCGCGTG CTGGAACAGA CCCTGGAGGC ATCGCACGCA
TGA
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| Protein sequence | MSALTFPPLR VTDPAVFGRV AVLLGGSSSE REVSLDSGRN VLEALQSRGV DAFAVDGIPA
LAKALAAGGI DRVFNILHGH NGGGEDGIVQ GLMDAFGVPY TGSNVLGSAL SMDKIRTKQV
WLSLGLPTPQ YRKVTAEDVH ANAAALGLPV VVKPANEGSS VGISRVTDDA GLDEAVALAA
RYDGQLLMEQ MVIGDELTVA ILGDVALPSI RIVPKGQWYD YNAKYIAEDT QYLCPGLDGD
AEDEIRRIAL AAFRAAGCRG WGRVDVMRDR DSGRFFLLEV NTAPGMTSHS LVPKAARQAG
IGFEELVWRV LEQTLEASHA
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