| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0598 |
|---|
| Symbol | murE |
|---|
| ID | 6477544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 707571 |
|---|
| End bp | 709079 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642729743 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_002026986 |
|---|
| Protein GI | 194364376 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCTT CGATGTTGCT TTCGCAGTTG CTTCCGGACG TTGCTCTTGC AGGGCACGAC
CCCGTTCTGA CCGGCCTGGT GCTGGACAGC CGCGCCGTGC GCCCCGGCAA TGCCTTCGTC
GCCATCGCCG GTTTCGGCGC GCATGGCCTG GGCTTTGTCG AGCAGGCCCG TGCGGCGGGC
GCCGGCGCCA TCCTGTTCGA ACCGCCGGCA CCGGCCGAGC TGCCGGCACC GGTTGATGCA
ATCGCCGTGC CGGGCCTGCG CGCGCGCATG GGTGCGATGG CCGACCAGTT CCATGGCGCA
CCGTCGCGGG CGATGGCGAT GGTCGGCGTG ACCGGCACCA ACGGCAAGAC CTCCACCGTG
CAGCTGCTGG CCCAGGCCTG GCACCTGCTC GGAACGCCCA GTGGCAGTAT CGGCACGTTG
GGCGCCGGAC TTTATGGTGC GGTTGAACCG ACCGGTTTCA CCACGCCGCT GGTGCTGCAG
ATGCATGCGC TGCTGGCGCA GCTGCGTGAC GCCGGCGCGC GCGCGGTGGC GATGGAAGTC
AGCTCGCATG CGCTGGACCA GGGCCGCGTG GATGCGGTGC ACTACGACGT GGCGGTGTTC
ACCAACCTCA CCCGCGATCA CCTGGACTAC CACGGCGACA TGGCCAGCTA CGGCGCGGCC
AAGGCGCGGT TGTTCCATCG TCCGGGCCTG AAGGCCGCTG TGATCAATCT TGACGACGCA
TTCGGTCGCC AGCTGTTCGC CGGCCTGCCG GCGGGCGTGC AGCCGATCGG CCTGAGCTCG
CGCGGTGCCA CCGATGCCAT CGTGCGCGCC GAGGCGCTGC AACTGGACGG CCGTGGCATT
GCCTTCGAAC TGGCCATCGA CGGCCAGCGC GCGGCGGTGC AGTCGCCTTT GCTGGGCCGC
TTCAATGTGG ACAACCTGCT GGCCGTGGCC GGTACCCTGC ATGCGCAGGG CCAGCCGCTG
GCGCGCATTG CCGAGGTGCT GTCGGCGCTG CAGCCGATCC GCGGCCGCAT GAACCGCCTC
GGTGGCGAGG ATGGCCTGCC GACCGTGGTG GTGGATTACG CCCACACCCC GGACGCACTG
GAACAGGCGC TGGACAGCCT GCATGGCCAC CTGCAGGGCA CGCTGTTCTG CGTGTTCGGC
TGCGGTGGCG AGCGTGATAC CGGCAAGCGC CCGCAGATGG CCGCGATCGC CGAGCGCCTG
GCCAACCAGG TCATCGTTAC CGACGACAAT CCGCGTGGCG AAGATGGCGA CGTGATCGTG
GCCGACATCC TGGCCGGATT TACCGATGCC TCCGCCGTGA CCGTGCAGCG CAGCCGCGCG
CGTGCGATCG GCCTGGCGGT GAAGCGCGCC AATGCAGGCG ACATCATCCT GATTGCCGGC
AAGGGCCACG AGCCGTACCA GGAAGTGAAT GGCGTGCGCC ATGACTTCGA TGACACCGAA
GTGGCTGCGG CTGCACTGGC GGCCAAGGCC GGTGTGCTGG CGGCCCAGGC CGGGGAGGGC
ATCGCATGA
|
|---|
| Protein sequence | MSPSMLLSQL LPDVALAGHD PVLTGLVLDS RAVRPGNAFV AIAGFGAHGL GFVEQARAAG
AGAILFEPPA PAELPAPVDA IAVPGLRARM GAMADQFHGA PSRAMAMVGV TGTNGKTSTV
QLLAQAWHLL GTPSGSIGTL GAGLYGAVEP TGFTTPLVLQ MHALLAQLRD AGARAVAMEV
SSHALDQGRV DAVHYDVAVF TNLTRDHLDY HGDMASYGAA KARLFHRPGL KAAVINLDDA
FGRQLFAGLP AGVQPIGLSS RGATDAIVRA EALQLDGRGI AFELAIDGQR AAVQSPLLGR
FNVDNLLAVA GTLHAQGQPL ARIAEVLSAL QPIRGRMNRL GGEDGLPTVV VDYAHTPDAL
EQALDSLHGH LQGTLFCVFG CGGERDTGKR PQMAAIAERL ANQVIVTDDN PRGEDGDVIV
ADILAGFTDA SAVTVQRSRA RAIGLAVKRA NAGDIILIAG KGHEPYQEVN GVRHDFDDTE
VAAAALAAKA GVLAAQAGEG IA
|
|---|
| |