| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0576 |
|---|
| Symbol | nrdR |
|---|
| ID | 6477521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 687349 |
|---|
| End bp | 687870 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642729721 |
|---|
| Product | transcriptional regulator NrdR |
|---|
| Protein accession | YP_002026964 |
|---|
| Protein GI | 194364354 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTGCC CCTTCTGCCA ACATGCCGAT ACCCGGGTCA TCGACTCGCG CGTCTCCGAA
GACGGCGCGA CGATCCGTCG TCGGCGTGAA TGCGAAGCCT GTGGCGAGCG CTTCAGCACC
ATGGAGACGG TGGAGCTGAA GCTGCCGGCC ATCGTCAAGA GCGATGGCAC CCGCGAGGCG
TTCGACCAGC GCAAGGTCCG CGCTGGCTTC GACCGCGCGC TGCAGAAGCG TGCCGTGGCC
GAAGACAAGA TCGAAGCGGC GGTGCGTGCG GTGGTCCACC AGCTGCGCAT CAGCGGCGAG
CGCGAAGTAC CCTCGATCAA GGTCGGCGAG TTCGTCATGA ACGAACTGCG CAAGCTGGAT
CATGTCGGCT ATGTGCGCTT TGCCTCGGTG TACCGCAGCT TCGAGGACGT GGCCGATTTC
CGCGAGGAGA TCGAGAAGCT GGAGCGCGAT CTGCCCTCCA GTACCGAACA GCTGCAGCTG
CTGGGCGATG TGATTGCCCT GACCAAGAAG AAGAAGGGCT GA
|
|---|
| Protein sequence | MHCPFCQHAD TRVIDSRVSE DGATIRRRRE CEACGERFST METVELKLPA IVKSDGTREA
FDQRKVRAGF DRALQKRAVA EDKIEAAVRA VVHQLRISGE REVPSIKVGE FVMNELRKLD
HVGYVRFASV YRSFEDVADF REEIEKLERD LPSSTEQLQL LGDVIALTKK KKG
|
|---|
| |