Gene Smal_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0557 
Symbol 
ID6477461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp662294 
End bp663148 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content72% 
IMG OID642729702 
Producthypothetical protein 
Protein accessionYP_002026945 
Protein GI194364335 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.17155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0555578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCGA TCGTGTTGTT GCCGCTGTGC GTGGACGATG CCGCGCTCGA CCGCTGCCTG 
GCCGCGCTGG ATGCCGGCAC CGCGCCGGGT ACCGCGGTCT GGCTGGCCGA TGACGCGCAG
ACCGGGCCGC GTGCGCAGGC GGTGGTGGAA CACTGGTTGG CGCATACGCC GTTGCAGGCC
GAATACACCC GCCGCGCGCG GCCGTTGGGC GAGGTCGCCC ATCTGGATGA GATGCTGCGC
GCCTGCGAGG GCCTGGACGT GGCCGTGCTG GCGCCGGACA GCGTGCCAGC ACCCGGCTGG
CTGCAGCAGC TGCAGGATGC CTTCGCCCGC GACGCCGCCA TCGCCACCGC AACACCGTGG
TGCAATGCCG GCGAAACAGC CGCGTGGCCG CGATTGGGCG AAATCAATCC CGAACCGGAG
GACCCGGCGC TGCTGGCACA CACCTGTGCC ACGCTGCCGG TGCTGCATCC GGAGCTGCCC
TCGGCAGTCA CCCACGCGGT GCTGGTGCGC GGCAACGCGC GCCGGCGTGC CGGCGGCCTG
GACGTGGAGA GCTACGCCGG CTGGAACGCG GCGCTGGTCG ACCTGAGCCT GCGCATGGCC
GGGCTGGGTT GGCGCAACGT CCTGTGCGAG ACCGCCTTCG TCGGCCGCGC AGGGGAGGCC
GTCAGCCGCG ATGGCGATCT TGAAGCCCTG GCCGCGCGCT GGCCGGCCTG GGTGCCGCGA
CTGGCCGATT TCCTGATGCA CGATCCGCTG CACGGGTTGC GCGCCGATCT GCAGCAGCGC
ATGCGGCAGG CGATAATGCC GGCCGAGCAG GGCGACCTGT TCGTCTCGTC TTCCGCGCCG
GAGCCTCCTG CTTGA
 
Protein sequence
MGAIVLLPLC VDDAALDRCL AALDAGTAPG TAVWLADDAQ TGPRAQAVVE HWLAHTPLQA 
EYTRRARPLG EVAHLDEMLR ACEGLDVAVL APDSVPAPGW LQQLQDAFAR DAAIATATPW
CNAGETAAWP RLGEINPEPE DPALLAHTCA TLPVLHPELP SAVTHAVLVR GNARRRAGGL
DVESYAGWNA ALVDLSLRMA GLGWRNVLCE TAFVGRAGEA VSRDGDLEAL AARWPAWVPR
LADFLMHDPL HGLRADLQQR MRQAIMPAEQ GDLFVSSSAP EPPA