| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0551 |
|---|
| Symbol | |
|---|
| ID | 6477455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 655303 |
|---|
| End bp | 655935 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642729696 |
|---|
| Product | general secretion pathway protein J |
|---|
| Protein accession | YP_002026939 |
|---|
| Protein GI | 194364329 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4795] Type II secretory pathway, component PulJ |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.094871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGC GCGCTGCGGG GTTCACCCTG ATCGAGGTGA TGCTGGCCAC GGTGCTGCTG
GCCGGTGGCC TGGCGCTGGC GTTCGCCAGC GTGCGCTCGG CAATGGCGGT CAGCCAGCGC
GGCGAGCAGA TCGCTGCCGA GAGCGAACGC ATGCGCGCGG TGCAGGCGCT GCTGCGGCGG
CAGCTGGCCG GCGCGCTGCG CACACCGCTG GAAGTACCCG ACCCCACCCG TGAGCCGATG
TTCTTCCAGG GCGAAGAACA GCGCATGTTG TTCGCCGCCG ACCTGCCCGG CTATCTCGGC
CGCGGCGGAC CGTACCTGCA CGCGTTGCAG GTGGATGGCC GCAGTGGCCA GCAGCGCCTG
CTGCTGGACC TGGTGCTGCT GCAGGAGGGC GAGCGCATCG CCGAGACGCC GCCGCGTCCA
CCGGAAGTGC TGGTGGACGG CCTGAAGTCG GTGCAACTGC GCTATCGCGG CATTGACGCC
AGCACCGGCC AGGTGACCGA CTGGCTGCCG CGCTGGGACG ATACGCGGCG CCTGCCGATG
CTGGTGGAAG TACAGATCGT GCCGGCCAAG GGCGCGCCGT GGCCGGTGCT GGTGGTCGCA
CCGCGTGCCG GTGGCAGCGG TGGTGCGCGA TGA
|
|---|
| Protein sequence | MKRRAAGFTL IEVMLATVLL AGGLALAFAS VRSAMAVSQR GEQIAAESER MRAVQALLRR
QLAGALRTPL EVPDPTREPM FFQGEEQRML FAADLPGYLG RGGPYLHALQ VDGRSGQQRL
LLDLVLLQEG ERIAETPPRP PEVLVDGLKS VQLRYRGIDA STGQVTDWLP RWDDTRRLPM
LVEVQIVPAK GAPWPVLVVA PRAGGSGGAR
|
|---|
| |