| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0540 |
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| Symbol | xerD |
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| ID | 6477444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 632346 |
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| End bp | 633323 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642729685 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_002026928 |
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| Protein GI | 194364318 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0147694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.75101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCTG TTTCCACCCC CGCCGAACGC CGCCAGCTGG TGCAGCAACT GCCCGAGCTA
CGGGCCGATG ACAGCCTGCG CATCCAGCGC TTCCTCGATG CGATCTGGGC CGAGAACGGC
CTGGCCCGCG CCACCCTCGA CAGCTACCGG CGCGACCTGG AAGGGTTGGC ACGCTGGACC
GATGGGCGCG AGGGTGGCCT GGCCGGCATT GAACGTCCCG GGTTGTTCGA CTACCTGGCG
TGGCGTACCC GGCATGGCTG GTCGCCGCGC AGCAACGCGC GCCTGCTGTC GGCGCTGCGC
GCGTTCTTCG CTGATGGTGT GCGCCGGGGC GATCGCAGCG AGGACCCCAG TGCACTGCTG
GATCCGCCGA AGCTGCCGAG GCTGCTGCCC AAGGCGTTGG CCGAAAGCCA GATCGACGCA
CTGCTGGCGG CGCCGGACAT CGACAGCCCG CTGGGCCTGC GCGATCGCGC CATGCTGGAG
CTGATGTATG CCGCCGGGCT GCGCGTTAGC GAGCTGGTGC TGCTGCCGGC CACGGCGGTC
AACCTGCGCC AGGGAGTGTT GCGGGTCACC GGCAAAGGCA GCAAGGAACG GCTGGTGCCG
TTGGGCGAGG AGTCGCAGCA TTGGCTGGAG CGCTATCTGC AGCAGTCGCG GCCGCAGCTG
GTTGGCAAGG GCAAAGTGCA GGCCTTGGCC GATGGGCAGA CACCGTTGTT CATCGAGCCG
ACGCTGCATG CGTTGACCCG GCAGGCGTTC TGGCACCTGG TCAAGCGCCA CGCACAGGTG
GCCGGCATCG ATCCGGCACG GATCAGCCCG CATGCCCTGC GCCACAGCTT CGCCACCCAC
CTGCTCAACC GGGGCGCGGA TCTGCGCGCG CTGCAGATGC TGCTGGGCCA CAGCTCGCTG
TCGACCACCC AGATCTACAC GCTGGTGGCG CGCGAACACC TGCAGAAACT GCACGCCCGC
CATCACCCGC GCGGCTGA
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| Protein sequence | MAPVSTPAER RQLVQQLPEL RADDSLRIQR FLDAIWAENG LARATLDSYR RDLEGLARWT
DGREGGLAGI ERPGLFDYLA WRTRHGWSPR SNARLLSALR AFFADGVRRG DRSEDPSALL
DPPKLPRLLP KALAESQIDA LLAAPDIDSP LGLRDRAMLE LMYAAGLRVS ELVLLPATAV
NLRQGVLRVT GKGSKERLVP LGEESQHWLE RYLQQSRPQL VGKGKVQALA DGQTPLFIEP
TLHALTRQAF WHLVKRHAQV AGIDPARISP HALRHSFATH LLNRGADLRA LQMLLGHSSL
STTQIYTLVA REHLQKLHAR HHPRG
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