Gene Smal_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0538 
Symbol 
ID6477442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp630609 
End bp631715 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID642729683 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_002026926 
Protein GI194364316 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0426669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.993388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGC GCCCGATGCG TTTCGATCTG TACCTGGGCC AGTCGGTATT CACGACGGTG 
CTGTTGACCT GGACGGTGCT GGTCGGCCTG GACGTGGTGA TGGCCTTCTC CGGCGAGTTC
AAGGACATCG GCAAGAACGG CTACTCGCTG GGCCATGCCG CAGCCTGGGT GCTGTACACG
GTGCCGCGGC GGGCCTACAC CTTCTTCCCC ACCGCTGCGG TGATCGGCGC CCTGATGGGC
CTGGGCCAGC TGGCGGCGAC CTCCGAACTG ACCGCGCTGC GCGCGCTGGG GCTGTCGCGC
AAGCGCCTGA GCGTGTCGGT GGCGATTGCG CTGTCACTGC TCACCGCAGT GATGGTGCTC
AGCGCCGAAA CGCTGGGACC CTGGGGCCAG GATCGAGCCG ATGCGCTGAA GTCCAGCGCC
AAATGGGGCC AGGACATTTC CACTGCACGC TACTCCGGGC TGTGGGCGCG GGAGGGCGAC
ACCTTCCTCA GCGCCGCCGG TGGCGAAGAG CAGCTGGTGG GTGACAAGGG CACGCGGTTG
ATCCTGCGCG ACGTGCGCCT GTACCGCATC GCCGAGGACG GACAGATCGC CTCGTTGACC
CACGCGGCCA CCGCCGAGCA CGACAACGAT GGCTGGGTGT TGACCGGTGT GCGCCGGGAT
ACGTTCGGCG AACGTTCGGC CACGCGCGAG GAAGTGGCGC GCGAGCCGTG GAATTCCAAG
CTGGATGCCG GCGCGCTGGC GACCGGTATC GCCAAGCCGC GCAACCTCAG CGTGGCCGAG
CTGCGTACCA GCATCGAGTA CCGCGAACGC AATGGGCTGG ATGCGCGCGA CTATGAGGAT
GTGTACTGGA GCCGCTGGTT CTACCCGGTG AACGTGCTGG CGCTGTGCCT GGCGGCGGTG
CCGTTCGCAT TCGGCTCGCT GCGCAGCGGC GGCATGGGCA AGCGCCTGTT CCTGGGCATC
CTGTTCGCGC TGGGCTTCTG GTTGCTGCAG CTGTTCTTCG GCCGCATGGC CGGCGCGTTG
AAGTTCGATT ACCGCATTGC CTATGCGCTG CCGCCGATCG TGATGCTGGC GATATCCGGA
CTGCTGTTCC GGCGCAAATC GGGCTGA
 
Protein sequence
MRLRPMRFDL YLGQSVFTTV LLTWTVLVGL DVVMAFSGEF KDIGKNGYSL GHAAAWVLYT 
VPRRAYTFFP TAAVIGALMG LGQLAATSEL TALRALGLSR KRLSVSVAIA LSLLTAVMVL
SAETLGPWGQ DRADALKSSA KWGQDISTAR YSGLWAREGD TFLSAAGGEE QLVGDKGTRL
ILRDVRLYRI AEDGQIASLT HAATAEHDND GWVLTGVRRD TFGERSATRE EVAREPWNSK
LDAGALATGI AKPRNLSVAE LRTSIEYRER NGLDARDYED VYWSRWFYPV NVLALCLAAV
PFAFGSLRSG GMGKRLFLGI LFALGFWLLQ LFFGRMAGAL KFDYRIAYAL PPIVMLAISG
LLFRRKSG