Gene Smal_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0525 
Symbol 
ID6477429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp616865 
End bp618124 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content68% 
IMG OID642729670 
Productprotein of unknown function DUF1212 
Protein accessionYP_002026913 
Protein GI194364303 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.349985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG ACGCTCACAC GATCCCCACG CCCCAGGCCA CCTACGCACA GCGCGTGGCC 
TTTGTTTCCG AGATCGCCGG ACGCCTGCAC AGCTATGGCA CAACGGCTCA GCGCCTGGAA
ACGGCGGTGG TGGCACTGGC CCGCCAGCTC GATCTGGATT GTGAACCGTG GTCGAATCCC
ACCGGTATCA TTCTCAGCTT CAGCGACCCG GCGCAGGCGA TCGGCTCCAG TGACATCACC
CGCGTGATCC GCCTGGCGCC CGGTGAAAAC GATCTGCACA AGCTCAGCGT CGCCGACCAT
ATCGCCGAGG AAGTGGCCAA CGGGCGGATG AGCATCGCCC AGGGCCACAC CGCGCTGCGC
CAGCTGGACA AGGATCCGGG CCGCCGCGGC AAGCTGCGCA CCATCCTTTC GTTCACTCTC
GGTGCGGCCG GCGTGGCCGG CATGTGGAAG CTGCCGTGGC TGGACATCGC CACCGCCGGT
GTCATCGGCC TGATGATCGG CCTGCTCGGC ATGGTCACCG ATCGCCGCCC GGCCACCCGC
GAGGCAGCCG AGGCACTGGC TGCGCTGCTG GCCGGCCTGG TGGCCACGCT GGTGGCGTCC
TTCGTCGGCG CGCTCAACCT CAATACGGTG ATCATCGCCT CGCTGGTGGT GCTGCTGCCA
GGCATGTCGC TGACCAACGC GGTCAACGAG CTGGCCAGCC AGCACTGGGT GTCGGGTACC
GCGCGCTTTG CTGGGGCGTT GACCACCATC ATGAAGCTCA GCGTCGGCGC AATGATCGCG
GTGACCCTGG CCGACGTGCT CGGCCTGGAT CCGGTGATCC GTGCGACGCG CCCGCAGGGG
CCATGGGTCG AGTGGGGTTC GCTGCTGACC GCGGCCTTCG CTTTCGCGAT GCTGTTCAAG
GCCAACCGTC GCGACTATCC GTGGGTGATC GCCGCCTCGG TGGCCGGCTA TGCGATCTCC
AAGTTCGGCG GCCATGCCTG GGGTGCGCCG GCCGGCATCT TCCTGTCGGC GATGCTGCTG
ACCGCCGGTG GCAACCTGTT CGGGCGCCTC GTTGGCCGCC CGGGCGCGAT CATCCGTCTG
CCCGGCATCA TCATGATGGT GCCCGGCAGC ACCAGCCTGC GCGGCGTGCT GACCCTGGTC
CAGCAGCAGG ACGTAGGCGC CGGCCAGAGT GTGTTCCTGA CCGTGCTGAA CGTGGTGATG
GCGCTGGTTG CTGGCCTGCT GTTCGGCAAC CTGCTGATGC CGGCCCGCAA GACGCTGTGA
 
Protein sequence
MSADAHTIPT PQATYAQRVA FVSEIAGRLH SYGTTAQRLE TAVVALARQL DLDCEPWSNP 
TGIILSFSDP AQAIGSSDIT RVIRLAPGEN DLHKLSVADH IAEEVANGRM SIAQGHTALR
QLDKDPGRRG KLRTILSFTL GAAGVAGMWK LPWLDIATAG VIGLMIGLLG MVTDRRPATR
EAAEALAALL AGLVATLVAS FVGALNLNTV IIASLVVLLP GMSLTNAVNE LASQHWVSGT
ARFAGALTTI MKLSVGAMIA VTLADVLGLD PVIRATRPQG PWVEWGSLLT AAFAFAMLFK
ANRRDYPWVI AASVAGYAIS KFGGHAWGAP AGIFLSAMLL TAGGNLFGRL VGRPGAIIRL
PGIIMMVPGS TSLRGVLTLV QQQDVGAGQS VFLTVLNVVM ALVAGLLFGN LLMPARKTL