Gene Smal_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0516 
Symbol 
ID6477420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp605567 
End bp608881 
Gene Length3315 bp 
Protein Length1104 aa 
Translation table11 
GC content67% 
IMG OID642729661 
ProductNon-specific serine/threonine protein kinase 
Protein accessionYP_002026904 
Protein GI194364294 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0578806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGA CCTTCACAGA CGAAGACCTG TTCCGCTGGA TAGACGAATG GACACTGCAG 
AAAAGCGAGC AGTGCCTGGG TGGCGTGCGC AACCGGCAAC TCCGCGATGG CCTGCTGACG
GCCGAGGTAC AGGGTTCGGC CAGGCATCCC TACTACGTGG AGATCGATCT GACGGCCAGT
ACGCGCACCG CGCGCAGCCG CCTGCAGAGT GCCTGTTCCT GCCCCGTCGG CCGCACCTGC
AAGCATGTGG CGGCGGTGCT GGTCTCGTAC ATGCTGGATT CGCTTGCCAT GGACGACGAA
AGCCCCCTGA CCGAACAGAA CCTGACGCAA CCGCCGCGTC CTGAACTGCT GGCGGAGCTT
TCGCGTTGGC AGAGCGCGCG GATCCAGCCG GCCCAGCCAC GCCGGAACGG TGTCATCTTC
GAACTGTCCA CCTATAACCA CCACCCCGCC GTGCTGGTCC GGCGCGTCAA GTACGGGACC
GATGGTGCGA TCAGCACGGG CAAGTGGATG GATATCACCG CGGACCTGCT GCTGGATCCT
CCGGCATATC TCACGCCGAC TGATCTGGCG GTGATGATCC AGCTACGCAC CCAGCGGCAG
CCCGCGACGA AGGACGAATG GATCGACTTC GCGGCCACCC TGCAGTTGAT CGTCTCCAGC
GGCCATGGCT GGGTCTCCTG CGGTACGCAC GGCGACGTGC CGGCCCGGTC AGGAGCTCCA
CGCCGCGGCG AACTGGGCTG GACCGTTGGC ATGACGCAGG GCGCGACGCT GCTGGAACCC
GCGTTGAGCG TGGAGGGCGG CGCCAGAGGC GTGGTCCTGG GCCGGAGTGC GTGCTATCTG
GACCCGGTCA CCGGCGAGGT CGGTCCGCTG CTGCTGGATG TCAGGGCCGA GGACGCCGAC
GCCTTCCTGA GCCTGCCCAA TCTGTTACCC AACGAAGAAG CGGTGGTCGC ACAGATGCTG
CAACAGATCG ACCCTGCCCT GCCGCGCCCC GGTGCAAGCG ACACGCTGCC CACCCTGCAG
ATCAGCGCGA TGATCCCCGT GCTGCGCCTG CATACGATTG AGTTCCGGCC GGCATGGCTC
GGCCGCCGCG ACCCGTCGCA ATGGGCCGAT ATCGCGACCG TGGCCTTCGA GTACGACGAG
CATGTGCGGT TCCTGGATGA CCCGAGCCTG TTCGCCCACG ACACCGAGGG CCGGCTGGCC
CTGTTGCCCC GCGACCTGGC TGAAGAAGCG CGACGGGAAG GCGAGCTGCG CAGTGTGAAG
CTGCACCGCG ACCCGCAGCC ACGCGCGGTT CTGGATGGCG CAGGCCCTCA ATTCCAGCTG
CGTACCCATG ACTGGACCGG ATTCCTTCTG GGCGATGTAC CACGACTGGA GGCCCTCGGC
TGGAAGGTGG AGACGGATGA CGATTTCCGC CATCGCATCA CCCGGGTGGA TGAGATCGAT
CTGGACATCC AGGCAGACCC GGAGGACGCG GGCTGGTTCA ACCTGGGGTT GGAGATCCAG
GTGGATGGCC GCAAAGTGTC CATGGTTCCG CTGCTGCAGC AGGTGCTGCA CGCCGATCCG
CGCTGGTCGC GCGGCCAGCT GGACGCCATT GGCGATGACG AGAACATCCT GCTGACTGCC
AGCGGCAACA CGCGCCTGGC GCTGCAGGCG TCGCGACTGA AGCCGATCAT GGCCCTGCTG
GCCGACCTGT TTACCCAGCG TGGTGCACCG TTGCGCTTGT CGGCGCACGA CCGCGGCCGC
CTGCAGGCGC TGCAGGACGA TGCACACCTG CAGTTCCGGG GTCACAAGGA CACCCAGGCA
CTCGTGCAGC GCCTGCTGCA GGCGCCAGCA CCGGAAGACG TGGCACCGCC TGCGGGATTG
CAGGCGACGC TGCGCAGCTA CCAACGCGAA GGCCTGTCGT GGCTGCAGTA TCTGCGCCAG
CAGGGGCTGG GCGGCGTGCT GGCCGATGAC ATGGGCCTGG GCAAGACCCT GCAGACCCTG
GCCCATCTGC TGGTCGAGAA GGAAAGTGGC CGCCTGGACC GGCCTGCGCT GCTGGTGGTG
CCGACCTCGC TGCTGCACAA CTGGCAGAGC GAAGCGGCAC GCTTCACCCC GGGCCTGCGC
GTACTGACCC TGCACGGACC GGCACGTGAA GCGCTGTTCG AGGCTATCCC CGAGCACGAT
CTTGTACTGA CCACGTATCC CCTGCTGTGG CGCGACGAGC AGGCGTTGCA GTCCCATTCC
TACCATCTGC TGATCCTGGA CGAGGCGCAG CAGGTGAAGA ACCCGAAATC GCGGGCGGCG
GTCACGCTGC GCACGCTGCA GGCGCGTCAT CGCCTGTGCC TGACCGGTAC GCCGCTGGAG
AACCACCTGG GCGAACTGTG GACGCAGTTC GACTTCCTGC TGCCCGGGCT GCTCGGCAGT
GAAAAGCTGT TCAACCAGCA TTGGCGCCAC CCCATCGAAC GCGGCAGCGA CCAGCGCCGT
GCCCAACTGC TGGCGCAGCG GCTGCGCCCC TTCATCCTGC GCCGGCGCAA GGACCAGGTG
GCCGCCGAAC TGCCGCCGAA AACCCTCATC ACCCGTGCGG TGACAATGGA GGGCGGGCAG
CGTGATCTCT ATGAAACCGT ACGTGCGGCG ATGGAGAAGC AGGTCCGCGA GGCCATCAGC
GACAGCGGAC TGGCACGCAG CCACATCCGG GTACTGGATG CGCTGCTGAA GCTGCGCCAG
GTCTGCTGCG ATCCGCGCCT GCTGCCGGGC GAAACGCCGG CACGCAATGC CGGTTCGGCC
AAGCTAGAGC TGCTGCGCGA GATGCTGCCG TCGATGGTCG AGGAAGGCCG CCGCATCCTG
CTGTTCTCGC AGTTCACCGG CATGCTGGCG CTGATCGCGC AGGCGCTCGA CGGGCTGGGC
CTGGCCTATG TGACCCTGAC CGGTGATACC CAGGACCGGG TCACGCCGGT GCAGCGTTTC
ATGCAGGGCG AGGTGCCGCT GTTCCTGATC AGCCTGAAGG CCGGCGGCGT AGGGCTGAAC
CTGACCGCCG CCGACACCGT CATCCACTTC GATCCCTGGT GGAATCCGGC CGCCGAGAAC
CAGGCCAGTG ACCGTGCCCA TCGCATCGGC CAGCAGCAGC CCGTGTTCGT CTACCGGCTG
ATTGCCGCCG GCAGCATCGA AGAGCGGATC GCCGAGCTGC AGGAGCGCAA GGCGATGCTG
GCCGAATCGA TTCTTGAAGG CGGCGGCAGC GCCGGACCGC GCTTCAGCGA AGAGGACGTG
CAGGCGCTGC TGGCGCCGTT GCCGGGTGCT TTGCCGGCGC GACGCAAGGC CGGCCGGCAA
AGCAAGGTCC GCTAG
 
Protein sequence
MTPTFTDEDL FRWIDEWTLQ KSEQCLGGVR NRQLRDGLLT AEVQGSARHP YYVEIDLTAS 
TRTARSRLQS ACSCPVGRTC KHVAAVLVSY MLDSLAMDDE SPLTEQNLTQ PPRPELLAEL
SRWQSARIQP AQPRRNGVIF ELSTYNHHPA VLVRRVKYGT DGAISTGKWM DITADLLLDP
PAYLTPTDLA VMIQLRTQRQ PATKDEWIDF AATLQLIVSS GHGWVSCGTH GDVPARSGAP
RRGELGWTVG MTQGATLLEP ALSVEGGARG VVLGRSACYL DPVTGEVGPL LLDVRAEDAD
AFLSLPNLLP NEEAVVAQML QQIDPALPRP GASDTLPTLQ ISAMIPVLRL HTIEFRPAWL
GRRDPSQWAD IATVAFEYDE HVRFLDDPSL FAHDTEGRLA LLPRDLAEEA RREGELRSVK
LHRDPQPRAV LDGAGPQFQL RTHDWTGFLL GDVPRLEALG WKVETDDDFR HRITRVDEID
LDIQADPEDA GWFNLGLEIQ VDGRKVSMVP LLQQVLHADP RWSRGQLDAI GDDENILLTA
SGNTRLALQA SRLKPIMALL ADLFTQRGAP LRLSAHDRGR LQALQDDAHL QFRGHKDTQA
LVQRLLQAPA PEDVAPPAGL QATLRSYQRE GLSWLQYLRQ QGLGGVLADD MGLGKTLQTL
AHLLVEKESG RLDRPALLVV PTSLLHNWQS EAARFTPGLR VLTLHGPARE ALFEAIPEHD
LVLTTYPLLW RDEQALQSHS YHLLILDEAQ QVKNPKSRAA VTLRTLQARH RLCLTGTPLE
NHLGELWTQF DFLLPGLLGS EKLFNQHWRH PIERGSDQRR AQLLAQRLRP FILRRRKDQV
AAELPPKTLI TRAVTMEGGQ RDLYETVRAA MEKQVREAIS DSGLARSHIR VLDALLKLRQ
VCCDPRLLPG ETPARNAGSA KLELLREMLP SMVEEGRRIL LFSQFTGMLA LIAQALDGLG
LAYVTLTGDT QDRVTPVQRF MQGEVPLFLI SLKAGGVGLN LTAADTVIHF DPWWNPAAEN
QASDRAHRIG QQQPVFVYRL IAAGSIEERI AELQERKAML AESILEGGGS AGPRFSEEDV
QALLAPLPGA LPARRKAGRQ SKVR