Gene Smal_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0506 
Symbol 
ID6477410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp595014 
End bp595952 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID642729651 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002026894 
Protein GI194364284 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.076181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0104693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC TGGTACTCGG CGGCAACGGC CAGGTCGGCC AGGAACTGCT GCGCGCGCTG 
GTGCCGCTGG GCAAGGTGGT CACGACCACC CGCAGCGGCA TCCTGCCCGA TGGCAGCGTC
TGCGAAACCG CCGATTTCGA CCAGCCGGAC AGCCTGCCGG CCTTGCTCGA CCGGCTTCAG
CCATCGGTCG TAGTCAATGC GGCGGCTTAC ACCGCCGTCG ACCGTGCCGA ACGGGAAGTC
GACGCGGCCT TTGCGGTCAA CGCAGAGGCA CCGGGCGTGA TCGCGCGTTG GTGTGCGGCG
CATGATGTGC CGTTCGTGCA TTACTCCACC GACTATGTGT TCGATGGCCA GGGCACGGCA
CCGTACCGTG AGGACGAGCC GACCGCACCG CTGGGTGTCT ATGGCATCAG CAAGCGTGAT
GGCGAGGACG CCGTACGGGC TGCGGGAGGA CGCCATCTGA TCTTCCGCAC GGCATGGGTG
TATGCCTCGC ATGGCGCGAA CTTCCTGCGC ACCATGCTGC GTGTGGGCGC CGAGCGCGAT
GCGTTGCGGG TGGTGGCCGA CCAGATCGGT ACGCCCACTC CCGCCGCGCT GATCGCCGAT
GTCACCGCGC AGGCGCTGCA GCATCCGGGC CAGCTGTCTG GTACCTGGCA CCTGACAGCC
AGCGGCCAGA CCAGTTGGTA TGGGTTCGCC GAGGCGATCT TCGCCGAGGC GTTGGCCACC
GGCGTGTTGG CCAAAGTGCC GGCGGTCGAG GCGATTCCCA GTTCCGAGTA TCCGACCCCG
GCCAAGCGTC CGGCCTGGTC GGTGTTGGAC AACCGCAAGC TGCAGCAGGA CTTGGGCACT
GCTCTCCCGG ATTGGCATGA GGGACTTGCC ATTGTGATGA ATGAAATCAA ACGCTTGCGG
GATGAGTCCG CTGGGGGCAG GGCCTCCTGG ACGAACTAG
 
Protein sequence
MTVLVLGGNG QVGQELLRAL VPLGKVVTTT RSGILPDGSV CETADFDQPD SLPALLDRLQ 
PSVVVNAAAY TAVDRAEREV DAAFAVNAEA PGVIARWCAA HDVPFVHYST DYVFDGQGTA
PYREDEPTAP LGVYGISKRD GEDAVRAAGG RHLIFRTAWV YASHGANFLR TMLRVGAERD
ALRVVADQIG TPTPAALIAD VTAQALQHPG QLSGTWHLTA SGQTSWYGFA EAIFAEALAT
GVLAKVPAVE AIPSSEYPTP AKRPAWSVLD NRKLQQDLGT ALPDWHEGLA IVMNEIKRLR
DESAGGRASW TN