Gene Smal_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0490 
Symbol 
ID6478442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp575009 
End bp575869 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID642729635 
ProductABC-2 type transporter 
Protein accessionYP_002026878 
Protein GI194364268 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATG AAACGATTCT GAAGGCGGAA ATTGCTCGCC GCCGAGCACG CATCAGCAGC 
CATGACACCC AGATGAAGGC GCTGCCTGCA TTCATTCGCG ACGTTTCCGA GGGCATGGCT
GCCTGGCGCG CATGGACGTC ACTGGCGCTG CTGGATATCA AGCACAAGTA TCGCCGTTCG
GTGCTCGGGC CATTCTGGAT CACCATCAGC ATGTTCGTGC TGATTCTGGG TATCGGCCTG
CTCTACAGCC AGCTGTTCCG CATGAACCTG CGGGAGTACC TGCCCTATAT CGCCCTGGGT
GACATCGTCT GGATCTACAT CTCGACGACC GTCCAGGAGG GCTGCACGAC GTTCACTGCC
TCCGAAAACC TGATCCGTTC GATGCGCCTG CCGATGACCT TGCATGTGAT GCGGCTGGTG
ACACGCACGT TCATCGTGTT CCTGCACGGC GCGATCGCCT ACCTGCCGTT CGTCATATTC
CTCAAAATCG AACCTGAACT GGTCTGGCTG CTTGCTCTGC CGGGCGTTGC CCTAATCGTG
CTTGCGACGA TTCCGGTCAC GGCTATCTTT GGCCTGCTCT CGGCCCGCTT CCGTGACCTC
CATCCTGCGA TCGCGAATTT CATGCAGCTT GGTTTCTTCA TGACGCCGAT TATCTGGAAG
GCGGACATGC TGGGTCCGCA TCGTTGGGTT GCCGATATCA ATCCGATCTA CCACTTCATC
CAGATCGTGC GCATGCCACT GATGGGACAG GTTCCGGAAG CGCACTCGTA CTACTTCGTA
CTCGCCTTCA TCGCTGCGGC GTTTGTGATC GCGCTTCCCT TCCTGGCGGC AAATCGCCAC
AAGATCTCGC TGTGGGTGTA A
 
Protein sequence
MNNETILKAE IARRRARISS HDTQMKALPA FIRDVSEGMA AWRAWTSLAL LDIKHKYRRS 
VLGPFWITIS MFVLILGIGL LYSQLFRMNL REYLPYIALG DIVWIYISTT VQEGCTTFTA
SENLIRSMRL PMTLHVMRLV TRTFIVFLHG AIAYLPFVIF LKIEPELVWL LALPGVALIV
LATIPVTAIF GLLSARFRDL HPAIANFMQL GFFMTPIIWK ADMLGPHRWV ADINPIYHFI
QIVRMPLMGQ VPEAHSYYFV LAFIAAAFVI ALPFLAANRH KISLWV