| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0489 |
|---|
| Symbol | |
|---|
| ID | 6478441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 573840 |
|---|
| End bp | 575012 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642729634 |
|---|
| Product | Cystathionine gamma-lyase |
|---|
| Protein accession | YP_002026877 |
|---|
| Protein GI | 194364267 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACG CTACTTCCCA GGATCGTGCC CTGGCCCTGG CTACCCTGGC CATCCACGGT
GGCCAGTCGC CGGACCCCAG TACCGGTGCG GTGATGCCGC CGATCTACGC TACCTCGACC
TATGCGCAGT CCAGCCCGGG TGAGCACCAG GGCTTCGAGT ATTCGCGTAC CCACAACCCG
ACGCGCTTCG CCTACGAGCG CTGTGTGGCC TCGCTGGAAG GCGGTACCCG TGGCTTCGCC
TTCGCTTCGG GCATGGCCGC CAGCTCGACC GTGATCGAGC TGCTGGACGC CGGCAGCCAT
GTGGTGGCGA TGGATGACAT CTATGGCGGC AGCTTCCGCC TGTTCGAGCG TGTGCGTCGC
CGTACCGCCG GGCTGGACTT CAGCTTCGTC GATCTGACCG ATCTGGCGGC GTTTGAAGCC
TCCATCACGC CGAAGACGAA GATGGTCTGG ATCGAGACCC CGACCAACCC GATGCTGAAG
ATCGTCGACA TCGCTGCGGT CGCCGCCATC GCCAAGCGCC ATGGCCTGAT CGTAGTGGTC
GACAACACCT TCGCCTCGCC GATGCTGCAG CGTCCGCTGG AGCTGGGCGC GGACCTGGTC
CTGCATTCGG CCACCAAGTA CCTCAATGGC CACTCGGACA TGGTCGGCGG CATGGTCGTG
GTCGGTGACA ACGCCGAACT GGCCGAGCAG ATGGCCTTCC TGCAGAACTC GGTGGGTGGC
GTGCAGGGCC CGTTCGACAG CTTCCTGGCC CTGCGTGGCC TGAAGACCCT GCCGCTGCGC
ATGAAGGCGC ATTGCGCCAA CGCGCTGGCC CTGGCCCAGT GGCTGGAAAA GCATCCGGCG
GTGGAGAAGG TGATCTACCC GGGCCTGGCC TCGCACCCGC AACATGAGCT GGCGGGCAAG
CAGATGGCTG GCTACGGCGG CATCGTTTCG ATCGTGCTCA AGGGCGGTTT CGATGCGGCC
AAGCGCTTCT GCGAGAAGAC CGAACTGTTC ACCCTTGCCG AATCGCTGGG CGGCGTGGAA
AGCCTGGTCA ACCACCCGGC GGTGATGACG CATGCGTCGA TTCCGGTGGC GCGTCGTGAG
CAGCTGGGCA TCAGCGATGC GCTGGTGCGG CTGAGTGTGG GTGTTGAGGA TCTGGGGGAT
CTGCAGGTGG ATCTGGGAGA GGCTTTGAAG TGA
|
|---|
| Protein sequence | MSNATSQDRA LALATLAIHG GQSPDPSTGA VMPPIYATST YAQSSPGEHQ GFEYSRTHNP
TRFAYERCVA SLEGGTRGFA FASGMAASST VIELLDAGSH VVAMDDIYGG SFRLFERVRR
RTAGLDFSFV DLTDLAAFEA SITPKTKMVW IETPTNPMLK IVDIAAVAAI AKRHGLIVVV
DNTFASPMLQ RPLELGADLV LHSATKYLNG HSDMVGGMVV VGDNAELAEQ MAFLQNSVGG
VQGPFDSFLA LRGLKTLPLR MKAHCANALA LAQWLEKHPA VEKVIYPGLA SHPQHELAGK
QMAGYGGIVS IVLKGGFDAA KRFCEKTELF TLAESLGGVE SLVNHPAVMT HASIPVARRE
QLGISDALVR LSVGVEDLGD LQVDLGEALK
|
|---|
| |