Gene Smal_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0480 
Symbol 
ID6478432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp564863 
End bp566278 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content68% 
IMG OID642729625 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002026868 
Protein GI194364258 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG AATCCCTGGG CCTTGCGCCC TTCCTGCTGC GTGCGCTCGC CGAGCAGGGC 
TATGAAACCC CGACCCCGAT CCAGCAGCAG GCGATCCCGC TGGTGCTGGC CGGCCGCGAC
CTGCTGGCCG GCGCGCAGAC CGGTACCGGC AAGACCGCTG CCTTTGGCCT GCCGCTGCTG
CAGCACTTGG GCACCGCCTC GCAGGAAGTG CGTACCGGCC CGCGCAAGCC GCGTGCCCTG
ATCCTGGCCC CGACCCGCGA GCTGGCCACC CAGGTGCATG ACAGCCTGCG CGGTTACAGC
AAGTACCTGC GCATCCCCAG CGCCTGCATC TACGGCGGCG TCGGCATGGG CAACCAGCTC
GACATCCTGC GCCGTGGCGT GGACCTGCTG GTGGCCTGCC CGGGCCGCCT GATCGACCAC
CTGGAGCGTC GCAGCATCGA CCTGTCCGGC ATTGAACTGC TGGTACTGGA CGAAGCCGAC
CGCATGCTGG ACATGGGCTT CCTGCCCTCG ATCAAGCGCA TCCTGGCCAA GCTGCCCAAG
CAGAACCGCC AGACCCTGCT GTTCTCGGCC ACCTTCGAGG ACAACATCCG CCAGCTGGCG
CTGGAATTCA TGCGCAACCC GGAGCAGATC CAGGTCACGC CGAAGAACAC CGTCGCTGAA
ACCATCACCC ATCGCGTGCA CCCGGTCGAT GGCGGCCGCA AGCGCGACCT GCTGCTGCAC
CTGCTGGCGC AGGACAGCCG CGAGCAGACT CTGGTGTTTG CCCGCACCAA GCACGGCAGC
GACAAGCTGG CCGCGTTCCT GGAAAAGTCC GGCATCAAGA CCGCGGCGAT CCACGGCAAC
AAGAGCCAGG GCCAGCGCCT GCGTGCACTG GGCGATTTCA AGGCCGGCCG GGTGACCGTG
CTGGTGGCTA CCGATATCGC TGCGCGCGGT ATCGACATCA ACGAGCTGCC GAAGGTGATC
AACTTCGACC TGCCGATGGT GGCCGAAGAC TACGTGCACC GCATCGGCCG TACCGGCCGC
AACGGCGCCA CCGGCCAGGC AATCTCGCTG GTCGCGCAGG ATGAAGTGAA GCTGCTGCGT
GCGATCACCC GCCTGCTCGG CCGCGACATG GACATCCGCG ATGTGCCGGG CTTCGAGCTG
CAGGTGCCGA TCCGCTGGGG CAACAGTGCA CCGGGCAAGG CCGAGCACGA AACCGGTGAG
CGCGCACCGC GCAAGAACCA CGCGCGCCGT CCGCACGGCG ATGCACCGCG TCACGCGCAT
GCCGGCCCGA AGAAGGCTGG CGGTGGTCGT CGTGAGGGCG GTGGCAATGG CCAGCAGCGT
GCCGGTGCAG GCGCCGGTCA GGGCCAGCGT CGTGGCGGTG CTGGCAATGG TGGTGGCCGT
GGCCGCGGCC AGGGTGGCGG CGGTCGCGCC AGCTGA
 
Protein sequence
MSFESLGLAP FLLRALAEQG YETPTPIQQQ AIPLVLAGRD LLAGAQTGTG KTAAFGLPLL 
QHLGTASQEV RTGPRKPRAL ILAPTRELAT QVHDSLRGYS KYLRIPSACI YGGVGMGNQL
DILRRGVDLL VACPGRLIDH LERRSIDLSG IELLVLDEAD RMLDMGFLPS IKRILAKLPK
QNRQTLLFSA TFEDNIRQLA LEFMRNPEQI QVTPKNTVAE TITHRVHPVD GGRKRDLLLH
LLAQDSREQT LVFARTKHGS DKLAAFLEKS GIKTAAIHGN KSQGQRLRAL GDFKAGRVTV
LVATDIAARG IDINELPKVI NFDLPMVAED YVHRIGRTGR NGATGQAISL VAQDEVKLLR
AITRLLGRDM DIRDVPGFEL QVPIRWGNSA PGKAEHETGE RAPRKNHARR PHGDAPRHAH
AGPKKAGGGR REGGGNGQQR AGAGAGQGQR RGGAGNGGGR GRGQGGGGRA S