Gene Smal_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0474 
Symbol 
ID6478426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp554414 
End bp556315 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content70% 
IMG OID642729619 
ProductAsparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_002026862 
Protein GI194364252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG TGGTTGGCGC CTGGCTGCCG CCGGCCGAGG ACGAGCACCT GCTGCAGCAG 
CTGGCGCCGA TGCTGCGCGC CCTGCAGCAA CGTGGCCGTG GCCGCATCGG TTACTGGACC
GACGCCGAGG CCGGCCTGGC GCTGGGTCAC TGCCGGGCGC CGACCGACAC TCCGCTGCAG
CCACTGAGCT CGGACTGTGG CCGTTACGTG CTGTGCCTGG ACGGTCGCCT GTACAACCGG
GCTGACCTGC AGTCGCAGCT GCGCGATCTG CCGCGCAGCT GCAGCGATGC ACGGCTGCTG
CTGCAGGCGA TTGTCGAGTG GGGCGTGGAG CGGACGCTGT CGCGTATCGA GGGCGCGTTC
GGTTTCAGTG TCTGGGACCG GGAGTCGCGC GCGCTGTGGC TGGCACGTGA CCCGGTAGGC
GAGCGGCCGC TGTACTACGG TTGGTACCAG GGCCAGTTCC TGTTCGCCTC CGAACTGAAG
GCGCTGCAGG CGTTCGCCGG CTTTGCGCCG AGCATCGACC AGGATGCGCT GAGCCTGCTG
CTGCGCCACG ACTATGTCCC GGCGCCGCAC ACCATCTACC GCGGCATCCA CAAGCTGGTG
GCCGGCGCGA TGCTGCGCAT CGACCTCAAC GACCATGCCG CCGGGGGCTC GAGCCAGGCT
GCGCAGGGCG GGTCGCGCTA CTGGTGCGCG CGCGAGGCGA TGCACAGCGC GCTGCAGGAA
CCGCTGCAGC CGGCGCCGAG CCTGGAACAG GCCACCGACC AGCTGGAAGC GGTGTTGCAG
AAGGCCATCG CCGCTCGCAT GCACTCGCCG CTGGCCTGCG GCGCGTTCCT GTCCGGCGGC
ACCGATTCGT CGCTGGTGAC GGCGATGATG CAGGCCCAAT CGACCCTGCC GATCGAGGCA
TGGACGGTGG GCTTCGACGA TCCGGGCCAC GATGAGAGCG ACTGGGCCAC GCAGGTCGCA
CGCCACCTGG GCGTGCAGCA TCACCTGCAC CGCATGGACG CGCGCCAGGG ACTGGACCTG
CTGCAGCGCC TGCCGCAGGT CTGGTGCGAA CCGTTCGCCG ACGCCTCGCA GCTGCCGACC
CTGTTGGCCA GCGAGCTGCT GGGCGCGCGT AAGCCGGTGG CGCTGACCGG TGATGGTGGC
GATGAGCTGT TCTTCGGCCA TCCCAGCTAT GGCCGCGCAC TGCGTAACGC ACGCCTGTGT
GGTGGCCTGC CGGACTGGGT ACGCGACCTG GCACGGCGCA GCGGCAACCG CATGAACGTC
GAACGTGGGC GCCTTGGTGG CTGGCGCGCG CTGGTAGCCG AGGTCGCTGC CAACGACGTG
GAAGGCCATT ACCTGCAGCG CGTGACGCGC TGGCGGCAGC CGGCACAGGT GGTGCTGGGC
GCGCGCGAAC CAATGACGAT CTTCCAGCAG CAGGACACCG CGCTGCCGGC CGAAGCGCGC
ATCCAGCTGC TGGATTTCCG CATGGACCTG GCCGAGGGCA TCCTCGCCAA GGTCGACCGT
GCCGGCATGG CGGCCGGCGT GGAAACCCGC GCGCCGCTGC TGGACATGGA TGTGGTGCGC
CTGGCCTGGC GCCTGCCGCA GCATTTGAAA TACCACGACG GTGAGCACAA GCGGATCCTC
AAGCACCTGC TGGCACGCTA CCTGCCGGAA CCACTGGTGT ACCGCCCAAA GCGCGGCTTC
GGCCCGCCGA TGGCACGCTG GCTGGCCGGT CCGTTGCGCG ACTGGGCCGA GGCACTGCTG
GACCCGCAGC TGCTGCGCAA CCAGGGATGC TTCGATGCAG TACGCGTGCG CGGCATCTGG
GAGGCGTTCC TGCGCGGTGA GCGCAAGTGG CACACGCACC TGTGGAACGT GTTGATGTTC
CAGGCGTGGC ACCAGCACTG GCACGGTGGT CGCGGGCGCT GA
 
Protein sequence
MSGVVGAWLP PAEDEHLLQQ LAPMLRALQQ RGRGRIGYWT DAEAGLALGH CRAPTDTPLQ 
PLSSDCGRYV LCLDGRLYNR ADLQSQLRDL PRSCSDARLL LQAIVEWGVE RTLSRIEGAF
GFSVWDRESR ALWLARDPVG ERPLYYGWYQ GQFLFASELK ALQAFAGFAP SIDQDALSLL
LRHDYVPAPH TIYRGIHKLV AGAMLRIDLN DHAAGGSSQA AQGGSRYWCA REAMHSALQE
PLQPAPSLEQ ATDQLEAVLQ KAIAARMHSP LACGAFLSGG TDSSLVTAMM QAQSTLPIEA
WTVGFDDPGH DESDWATQVA RHLGVQHHLH RMDARQGLDL LQRLPQVWCE PFADASQLPT
LLASELLGAR KPVALTGDGG DELFFGHPSY GRALRNARLC GGLPDWVRDL ARRSGNRMNV
ERGRLGGWRA LVAEVAANDV EGHYLQRVTR WRQPAQVVLG AREPMTIFQQ QDTALPAEAR
IQLLDFRMDL AEGILAKVDR AGMAAGVETR APLLDMDVVR LAWRLPQHLK YHDGEHKRIL
KHLLARYLPE PLVYRPKRGF GPPMARWLAG PLRDWAEALL DPQLLRNQGC FDAVRVRGIW
EAFLRGERKW HTHLWNVLMF QAWHQHWHGG RGR