Gene Smal_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0471 
Symbol 
ID6478423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp550566 
End bp552035 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content69% 
IMG OID642729616 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002026859 
Protein GI194364249 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.121358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC CCAATCTGTG GCAGAAGCTG GCGGCGGTGA TCGCCGCGCT GATGCTGATG 
TGCTGCATGG CGCTGCTGGC ACTGCAGATG CGCGCCAACA CCCGCCATGA GCAGGAAGTG
GTGCAGCGGC TGTCGCTGGG CCTGGCCGAA CACATCGCCC AACGCAGCGA ACTGATGGAC
ACCAGCGGCA TGCGCGATGC TGCGGTGCGT GCGCTGTTCG GCCAGCTGAT GGCGGTCAAT
CCCAGCGTCG AGGTCTACCT GCTGGACGAC CAGGGCCGCA TTCTCGGCCA CGACGCGCCC
AGCGGTCATC TGGTGCGCAA CAAGGTGGAC GTGGCACCGC TACGCCGCCT GCTGTCGGGT
GCGCCACTGC CGATCCTCGG CGATGACCCG CGCAGCGCCG ATGGCCGCAA GGTGTTCAGT
GCCGCACCGT TGATCGTGCA GGGGCGCCAG GCCGGTTACG TGTACGTGGT GCTGGTCGGT
GAACACCGGC AGATGCTGGC CGACGACCTG GCGGCGGGCA GCCAGTGGAA CACCACATGG
TGGTCGGTGA TGCTGGTCGG AAGCCTCGGC CTGCTGGCCG GGCTGGTGGC GTTCTACTGG
GTGACCCGTC CGCTGCGGCG GCTGACCCGG CGCATCCAGG CCTTCGATAT CGATGCGCCG
ACACCGTTGC CGCCGCCCGA ACCGCTGCGC CCGGGCGAGC GCGACGAGCT GGTGATTCTC
GAACATGCAC ATGCGCAGAT GGCGCAGCGG CTGGGTGAGC AGTGGCAGCA ACTGCGCCAG
CAGGACCTGC AGCGGCGCGA GCTGGTCGCC AACATCTCGC ACGACCTGCG TACGCCGTTG
TCGTCGCTGC ATGGCTATCT GGAAACGCTG GCGCTGAAGG ACGTCACGCT GTCACCGGAC
GAGCGCCGCC GCTACCTCGG TATCGCGCTG GCACAGAGCG CCAAGGTTGG CCGGCTGGCG
CGCGCGCTGT TCGAGCTGGC GCGGCTGGAG CACGGTGAAG TGCGTCTGGA GTGGGAAGTG
TTCGCGCTGC CGGAACTGCT GCAGGACGTA CTGCAGAAGT TCGAGCTGGC CGCGCAGGCG
CGCAACCAGC GCCTGCACGC CGAGTTCCCG CCGGGCCTGC CGCTGGTACG TGCCGACCTG
GGCCTGGTCG AGCGGGTGCT GACCAACCTG CTCGACAATG CATTGCGGCA CGCGCCGGAA
GGTGGGCGGA TCGAAGTGTG CCTGCGTGCG ACCGCGGACA GCATCGAGGT GAGCGTGGCC
GATGATGGTC CCGGCGTGGC AGCGGCGCTG CGCGCACAGT TGTTCCAGGC GCCGGCCGCA
CTGGGCGCAC GGCGTGGCGA GAACGGTGGC CTCGGCCTGT TGATCGTGCA GCGTATCGTG
CAGCTGCATG GCCGCCGCAT CGAACTGCGC GACAGTGAGC GTGGCGCGCT GTTCGTGTTT
GCCTTGCCGC GCGCGGAGCC GGCGGCCTAG
 
Protein sequence
MIKPNLWQKL AAVIAALMLM CCMALLALQM RANTRHEQEV VQRLSLGLAE HIAQRSELMD 
TSGMRDAAVR ALFGQLMAVN PSVEVYLLDD QGRILGHDAP SGHLVRNKVD VAPLRRLLSG
APLPILGDDP RSADGRKVFS AAPLIVQGRQ AGYVYVVLVG EHRQMLADDL AAGSQWNTTW
WSVMLVGSLG LLAGLVAFYW VTRPLRRLTR RIQAFDIDAP TPLPPPEPLR PGERDELVIL
EHAHAQMAQR LGEQWQQLRQ QDLQRRELVA NISHDLRTPL SSLHGYLETL ALKDVTLSPD
ERRRYLGIAL AQSAKVGRLA RALFELARLE HGEVRLEWEV FALPELLQDV LQKFELAAQA
RNQRLHAEFP PGLPLVRADL GLVERVLTNL LDNALRHAPE GGRIEVCLRA TADSIEVSVA
DDGPGVAAAL RAQLFQAPAA LGARRGENGG LGLLIVQRIV QLHGRRIELR DSERGALFVF
ALPRAEPAA