Gene Smal_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0465 
SymbolbioD 
ID6478417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp544192 
End bp544884 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content70% 
IMG OID642729610 
Productdithiobiotin synthetase 
Protein accessionYP_002026853 
Protein GI194364243 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000224118 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGC CCGCCACGCT ACCGCCTGCC CTGTTCGTCA CCGGCACCGA TACCGAGATC 
GGCAAGACCG CGGCCAGCAC CGCGCTGCTG CATGCACTGC GCCGGCGCGG CCTGCGCGCG
GTCGGCATGA AGCCGGTGGC CAGCGGCAGT GAGGATCTGG GACAGGGCCT GCGCAACGAG
GACGCGCTGG CGCTGCAGGC GGCCAGCTGG CCGGTGCCGG ACTATGCCGA CCTGAACCCG
TATGCGCTGC GGCAGCCGCT GGCGCCGGAG CTGGCTGCTG CCGAGGACGG CGTGCAGGTG
GAGCTGGCGC CGATCGTGGC TGCATTCGAG CGCCTGCGCG CGCAGGCAGA CATCGTGGTG
GTGGAGGGCG TTGGCGGTTG GCTGGCGCCG GTCTCGGCCA CGCTGGACCA GCTCGATCTG
GTGCGTGCGT TGCATCTACC GGTAGTGCTT GTGGTCGGCA TGCGGCTGGG CTGCGTCAAC
CACGCACGGC TGACTGCGCA GTCGCTGCAG GCCAGCGGCG TGGAGTGCCT GGGCTGGATC
GGCAATCACA TCGACCCGGC GATGCAGCGC CAGGAAGAGA ACATCGCGAC GTTGCAGCAG
CGGCTGTCGA TGCCGTGCTG GGGGCGGTTG CCGCATCTGC CGGGTGCGAA TGGTGAGGCG
CTGAGTGCCA ATCTGCACGC GGACCTGCGG TAG
 
Protein sequence
MPLPATLPPA LFVTGTDTEI GKTAASTALL HALRRRGLRA VGMKPVASGS EDLGQGLRNE 
DALALQAASW PVPDYADLNP YALRQPLAPE LAAAEDGVQV ELAPIVAAFE RLRAQADIVV
VEGVGGWLAP VSATLDQLDL VRALHLPVVL VVGMRLGCVN HARLTAQSLQ ASGVECLGWI
GNHIDPAMQR QEENIATLQQ RLSMPCWGRL PHLPGANGEA LSANLHADLR