Gene Smal_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0445 
Symbolalr 
ID6478397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp525348 
End bp526415 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content69% 
IMG OID642729590 
Productalanine racemase 
Protein accessionYP_002026833 
Protein GI194364223 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCTG CCCGCGCGCT GATTGATCTG GGCGCCCTGC GCAGCAACTA CCGCCTCGCC 
CGCGAACTGG GCGGTGGCAA GGCCCTGGCG ATCATCAAGG CCGATGCCTA CGGCCATGGC
GCCGTGCGCT GTGCGCAGGC GCTGGAAGGC GAGGCCGATG GTTTCGGCGT GGCCACCATC
GAAGAGGCGC TGGAACTGCG CCAGGCTGGC ATCGGTGCGC CGATCCTGCT GCTGGAAGGC
ATCTTCGAAG CCAGTGACAT GGCGCTGGTG GCCGAGCACG ATTTCTGGTT CGCCGTCGGT
TCACCGTGGC AGCTGGAGGC GCTGGCCGCC TTCGACAGCC CGCGTCCGTT GACGGTGTGG
CTGAAGCTGG ACAGCGGCAT GCATCGCCTC GGCCTGGACG TGGACAGCTT CCGCGCCGCG
CATGCGCGCC TGTCGGCGTT GCCGCAGGTC GAACGCGTCG TGCTGATGAC CCATCTGGCA
CGTGCCGATG AGCTGGACAG CGAACGCACC CACGAGCAGG CGGCGACGTT CGCCCGTGCC
ATCGACGGCC TTGAAGGCGA GACCAGCGTG TGCAATTCGC CGGCGCTGCT GGGCTGGCCG
GATGTGCGCA GCGACTGGGT GCGCCCGGGC CTGATGCTCT ACGGCGCCAA TCCGTTGCCG
GACAACACCG ATCTCACCGC GCGCCTGCGC CCGGTGATGA CCATGCAGTC CAAGGTGATT
GCCGAGCGCT GGATCGAGTC GGGGGAGCCG GTGGGCTATG GCGCCCGCTT CGTTTCCAAG
GCACGCACCC GCGTCGGCGT GGTCGCGCTG GGGTATGCCG ATGGCTATCC GCAGTTCGCG
CCGAACGGCA CCCCGGTGCT GATCGATGGC CAGCCCGGCG CGCTGATCGG CCGCGTATCG
ATGGACATGC TGACCGTGGA CCTGACTGCG CATCCGCAGG CGGGCGTTGG CAGCGTGGTG
GAGCTGTGGG GCAATGCGCC GACGCTGTCC GAGCTGGCGC CGCGCTGTGG CGTGAGTGCG
TACCAGCTGC CGTGTGGCGT CAAGCGCGTG GCCAGGGTGT ACATGTAG
 
Protein sequence
MRPARALIDL GALRSNYRLA RELGGGKALA IIKADAYGHG AVRCAQALEG EADGFGVATI 
EEALELRQAG IGAPILLLEG IFEASDMALV AEHDFWFAVG SPWQLEALAA FDSPRPLTVW
LKLDSGMHRL GLDVDSFRAA HARLSALPQV ERVVLMTHLA RADELDSERT HEQAATFARA
IDGLEGETSV CNSPALLGWP DVRSDWVRPG LMLYGANPLP DNTDLTARLR PVMTMQSKVI
AERWIESGEP VGYGARFVSK ARTRVGVVAL GYADGYPQFA PNGTPVLIDG QPGALIGRVS
MDMLTVDLTA HPQAGVGSVV ELWGNAPTLS ELAPRCGVSA YQLPCGVKRV ARVYM