| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0433 |
|---|
| Symbol | |
|---|
| ID | 6478385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 516484 |
|---|
| End bp | 518133 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642729578 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_002026821 |
|---|
| Protein GI | 194364211 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.396158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCA TCGAAGTCGT CCTGGCGATG CTGGTGGCCG TTGTCGCCAG CGGCTACCTG
GTTCGCGTCC TGCCGTTCTC ATTGCCGCTG CCGCTGGTGC AGATCGGCCT GGGTGCGGTG
ATCGCCGGGG TGTTCAACCG CGGGCACGCG TTGGAGCCGG AAGTGTTCTT CCTGCTGTTC
CTGCCGCCGC TGCTGTTCCT CGACGGCTGG CGCATCCCCA AGCAGGGCCT GTTCCGCGAT
AAAGGCGCGA TCCTCGAACT GGCGTTCGGC CTGGTGGTGT TCACCGTGAT CGGTGCCGGC
CTGCTGATCC ACTGGATGAT TCCGGTGATG CCGCTGGCAG TGTGCTTCGC GCTGGCGGCG
ATCGTGTCGC CGACCGACCC GGTGGCGGTC GGGGCGATCG CCTCCAAGGC GCCGATTCCC
AAGCGCCTGA TGCACATCCT GGAAGGTGAG TCGCTGCTCA ACGATGCGTC CGGCCTGGTC
TGCTTCCGCT TCGCGGTGGC GGCGGTGATG ACCGGTACCT TCTCGCTGGC CACGGCCTCG
CTGACCTTCC TGTGGGTGGC GGTGGCCGGC CTGGCGGTGG GCGTGGCGGT CACCCTCGGT
GTTTCCACCT TCCAGCGCTG GCTGTGGCGC CGCTTCGGCG AGGAGCCGGG TGCGGCGATG
CTGGTCAACC TGCTGATTCC GTTCGCGGCC TACCTGCTGG CCGAAGAGAT CAATGCCTCG
GGCATCCTGG CTGCGGTCGC GGCCGGCATC TCGATGAGCT ACGTGGAAAT GACCGGCCGC
GTCTCCGGCA GCATGCGCGT GCAGCGTGCC GGGGTCTGGA ACATGCTGCA GTTCAGCTTC
AACGGCATCA TGTTCGTGCT GCTGGGCGAG CAGCTGCCGG GCATTGTCGA ACGTGCCACC
ACCACCATGA ACGAGAGCGG CCACCAGAGC GCGTGGTGGT TGCTGGTCTA CGTGCTGGTG
ATCAATGCCA CGTTGATCAC GCTGCGCCTG CTGTGGGTAT GGCTGTCGCT GCGCTGGAAC
CTGCTGCGCG CGCGGCGTCG CGGGCTGGAG CGTGGCGAGG CGCCGAACTG GCGCATCGTG
GTGGCCACCT CGGTGGCCGG TGTGCGCGGT GCGATCACCC TGGCCGGCGT GCTGACGCTG
CCGTTGTTCC TGCCTGATGG CAGTCCGTTC CCGGCGCGCG ACCTGGTGAT CTTCCTGGCC
GCGGCGGTGA TCCTGTTCTC GCTGGTCGGC GCCAGCGTGG CGCTGCCGCA GTTGCTGAAG
GGCCTGCAGC TGCCGGCCGA TTCGGGTGAA CGCAAGGAAG AAGACCTGGC ACGCAGGCTG
TCATCGAAGG CCGCGCTGGC GGGGGTGGAG CGCATGCGCC AGCAGATGGT GATGAACCAG
AACACCGAGA ACGTGCAGTT GTACAACGAC GCCGCCTCGC GGGTGAGCCT GCTGTACCAG
CGGCACCTGG AGAAGGACAG CGACGGGCCC GACGTGGACC CGGAGAAGGT GCAGCGCATG
GAACTGGGCT ATCGCCAGCT GCGCAGCGCC GGCCTCAATG CCGAGCGCGA GGAACTGTTC
CGGCTGACCC GGCGCGGGGT GATCTCCGAC GAGATCTCGC GGCGCCTGAT CCGCAACCTG
GACCTGCTGG AATCGCGCAA GCGCGAATGA
|
|---|
| Protein sequence | MHTIEVVLAM LVAVVASGYL VRVLPFSLPL PLVQIGLGAV IAGVFNRGHA LEPEVFFLLF
LPPLLFLDGW RIPKQGLFRD KGAILELAFG LVVFTVIGAG LLIHWMIPVM PLAVCFALAA
IVSPTDPVAV GAIASKAPIP KRLMHILEGE SLLNDASGLV CFRFAVAAVM TGTFSLATAS
LTFLWVAVAG LAVGVAVTLG VSTFQRWLWR RFGEEPGAAM LVNLLIPFAA YLLAEEINAS
GILAAVAAGI SMSYVEMTGR VSGSMRVQRA GVWNMLQFSF NGIMFVLLGE QLPGIVERAT
TTMNESGHQS AWWLLVYVLV INATLITLRL LWVWLSLRWN LLRARRRGLE RGEAPNWRIV
VATSVAGVRG AITLAGVLTL PLFLPDGSPF PARDLVIFLA AAVILFSLVG ASVALPQLLK
GLQLPADSGE RKEEDLARRL SSKAALAGVE RMRQQMVMNQ NTENVQLYND AASRVSLLYQ
RHLEKDSDGP DVDPEKVQRM ELGYRQLRSA GLNAEREELF RLTRRGVISD EISRRLIRNL
DLLESRKRE
|
|---|
| |