Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0430 |
Symbol | |
ID | 6478382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 514157 |
End bp | 515038 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642729575 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002026818 |
Protein GI | 194364208 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.1625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC TCGAGGCGAT GCGCGTGTTC GTGGCAGTGG TCGAGCGCAA CGGCTTCAGT GCTGCCGCGC AGGCCCTGGA CCTGTCCACC GCCGGCGTCA CCCGCCACGT CGCCGCGCTG GAGAAGCGCC TGGCCACGCG CCTGCTCCAC CGCACCACGC GCCGGGTCAG CCCGACCAGT GCCGGTGCCG CCTACTACGC CCAGTGCGTG CGCCTGCTGG CCGAGTTCGA CGCGCTGGAG GCCAGCATCG GTGCGCAGGC GCTGGAGCCC TCGGGCACGC TGCGGATCAA CGCGCCGGTC AGCTGGGGCA TCGCCCGCCT CGGGCCACTA CTGGCCAGCT ACCGCGAGCG CTTTCCACAG GTGGAACTGG ACCTGGCCCT GTCCGACCGC CTGGTGGACA TGGTCGAAGA GGGCTACGAC GTGGCGATCC GCATCACCCG CGAGCCCAGT CCCACCTTGA TCGCGCGCCG CCTCGGCGAA TCGCGGGTGA GCCTGTGCGC CGCACCTTCC TACCTGGCCG CGCGCGGTGC GCCGAAGACC CCGCAGGAGC TGCAGGCACA TGCATGCCTG AGCTACAGCT ACTGGTCCGC CGGCGACCAT TGGCCGCTGC AGGGGCCCGG TGGCGAAGTG AAGGTGGCGG TAAGCAGCCT GCTGCACGCC AACAACGGCG ACGTGCTGCG CGAAGCAGCA ATCGCCGGCA TGGGCGTGAT CCTGCAACCG GATTTCCTGC TGGAAGACGC GCTGGCTGAT GGTCGCCTGG TGCGCATCCT GCCCGAATGG GAGGCCTCGC CGATCGGCAT CTTCGCGGTC TACACCAGCC GCAGCCACCT GGCGCCAAAG GTACGCAGCT TCATCGACCA TCTGGTGGAA ACCGGGGTGT AA
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Protein sequence | MDTLEAMRVF VAVVERNGFS AAAQALDLST AGVTRHVAAL EKRLATRLLH RTTRRVSPTS AGAAYYAQCV RLLAEFDALE ASIGAQALEP SGTLRINAPV SWGIARLGPL LASYRERFPQ VELDLALSDR LVDMVEEGYD VAIRITREPS PTLIARRLGE SRVSLCAAPS YLAARGAPKT PQELQAHACL SYSYWSAGDH WPLQGPGGEV KVAVSSLLHA NNGDVLREAA IAGMGVILQP DFLLEDALAD GRLVRILPEW EASPIGIFAV YTSRSHLAPK VRSFIDHLVE TGV
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