Gene Smal_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0430 
Symbol 
ID6478382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp514157 
End bp515038 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID642729575 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002026818 
Protein GI194364208 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.1625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC TCGAGGCGAT GCGCGTGTTC GTGGCAGTGG TCGAGCGCAA CGGCTTCAGT 
GCTGCCGCGC AGGCCCTGGA CCTGTCCACC GCCGGCGTCA CCCGCCACGT CGCCGCGCTG
GAGAAGCGCC TGGCCACGCG CCTGCTCCAC CGCACCACGC GCCGGGTCAG CCCGACCAGT
GCCGGTGCCG CCTACTACGC CCAGTGCGTG CGCCTGCTGG CCGAGTTCGA CGCGCTGGAG
GCCAGCATCG GTGCGCAGGC GCTGGAGCCC TCGGGCACGC TGCGGATCAA CGCGCCGGTC
AGCTGGGGCA TCGCCCGCCT CGGGCCACTA CTGGCCAGCT ACCGCGAGCG CTTTCCACAG
GTGGAACTGG ACCTGGCCCT GTCCGACCGC CTGGTGGACA TGGTCGAAGA GGGCTACGAC
GTGGCGATCC GCATCACCCG CGAGCCCAGT CCCACCTTGA TCGCGCGCCG CCTCGGCGAA
TCGCGGGTGA GCCTGTGCGC CGCACCTTCC TACCTGGCCG CGCGCGGTGC GCCGAAGACC
CCGCAGGAGC TGCAGGCACA TGCATGCCTG AGCTACAGCT ACTGGTCCGC CGGCGACCAT
TGGCCGCTGC AGGGGCCCGG TGGCGAAGTG AAGGTGGCGG TAAGCAGCCT GCTGCACGCC
AACAACGGCG ACGTGCTGCG CGAAGCAGCA ATCGCCGGCA TGGGCGTGAT CCTGCAACCG
GATTTCCTGC TGGAAGACGC GCTGGCTGAT GGTCGCCTGG TGCGCATCCT GCCCGAATGG
GAGGCCTCGC CGATCGGCAT CTTCGCGGTC TACACCAGCC GCAGCCACCT GGCGCCAAAG
GTACGCAGCT TCATCGACCA TCTGGTGGAA ACCGGGGTGT AA
 
Protein sequence
MDTLEAMRVF VAVVERNGFS AAAQALDLST AGVTRHVAAL EKRLATRLLH RTTRRVSPTS 
AGAAYYAQCV RLLAEFDALE ASIGAQALEP SGTLRINAPV SWGIARLGPL LASYRERFPQ
VELDLALSDR LVDMVEEGYD VAIRITREPS PTLIARRLGE SRVSLCAAPS YLAARGAPKT
PQELQAHACL SYSYWSAGDH WPLQGPGGEV KVAVSSLLHA NNGDVLREAA IAGMGVILQP
DFLLEDALAD GRLVRILPEW EASPIGIFAV YTSRSHLAPK VRSFIDHLVE TGV