Gene Smal_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0425 
Symbol 
ID6478377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand- 
Start bp505477 
End bp506064 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID642729570 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002026813 
Protein GI194364203 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.752712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.122961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGTC GCACCCGCGC CGAGATGGAA GAAACCCGCG CCACCCTGCT GGCCACCGCC 
CGCCGGGTGT TCAGCGAGCA TGGCTATGCC GCCACCTCGA TGGACGACCT GACCGCCCAG 
GCCGGGCTGA CCCGCGGCGC GCTGTACCAC CACTTCGGCG ACAAGAAGGG TCTGCTGGCG 
GCTGTCGTCG CCCAGCTCGA TGCCGAGACC GACCTGCGCC TGCAGGCGAT CAGTGATACC 
GCCGACGATG CATGGGAGGG CTTCGTGCAA CGTTGCCGCG CCTATCTTGA GATGGCGCTT 
GAGCCGGAGA TCCAGCGCAT CGTGCTGCGC GATGCGCGCG CGGTGCTGGG TGGCGCCTCA 
CCGGAATCGC AGCGGCACTG CGTGAACTCG ATGCAGCGCC TGATCGAGCA GCTGATCACC 
CAGGGTGCGG TGGCGCCGGT GGATGCGCAG GCGCTGGCGT CGCTGATCTA CGGCAGCCTG 
GCCGAGGCCG CGTTCTGGAT CGCCGACGGC GAGCAGGGCG ACGCGCGCCT GCGGCAGGCG 
ACGGCGGCGC TGGAGATGCT GTTGCGTGGG TTGAAGTCGA CGGAGTAA
 
Protein sequence
MVRRTRAEME ETRATLLATA RRVFSEHGYA ATSMDDLTAQ AGLTRGALYH HFGDKKGLLA 
AVVAQLDAET DLRLQAISDT ADDAWEGFVQ RCRAYLEMAL EPEIQRIVLR DARAVLGGAS 
PESQRHCVNS MQRLIEQLIT QGAVAPVDAQ ALASLIYGSL AEAAFWIADG EQGDARLRQA 
TAALEMLLRG LKSTE