Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0419 |
Symbol | |
ID | 6478289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 499213 |
End bp | 500862 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642729564 |
Product | peptidase M28 |
Protein accession | YP_002026807 |
Protein GI | 194364197 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0797301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGAG CAGTACTGGG CGTGCTGGCC CTGTCAGTGT CGAGCGCACT GATGGCGGCC ACCCCGAAAT TCGATGGCGC GCGGATCTCC GCCGACGTCA AGGAACTGGC CTCCGACGCC TACGAAGGCC GCTCCCCGGC CACCGCCGGC GAAGAGAAGA CCGTCACCTA TCTCAGCAAG CAGTTTGCCG ACGCCGGCCT GCAGCCGGGC GGCGACCTCA AGGACGGCAA GCGCCTGTGG ACCCAGGCCG TGCCGCTGCG CAAGGGCGAC ATCGTCGGCG CACCGCAGCT GGCGCTGCAC CAGGGCGGGA AGACCGTCAG CCTCGAACAG GGCAAGCAGA TTGCCGTGCG CGCCGCCATG AACGGCGCCA GCAACGTCGA CATCAGCAAG GCCCCGCTGG TGTTCCTCGG CTACGGCGTC AAGGCACCGG AGCGCAACTG GGACGACTTC AAGGGCGTGG ACCTGAAGGG CAAGATCGCC GTCGTGCTGA TCAACGACCC GGATTTTGAA ACCGGCCAGG GCGACTTCGA CGGCAAGGGC ATGACCTACT ACGGCCGTTG GACTTACAAG TACGAAGAGG GCGCACGCCA GGGCGCGCTG GGTGTGCTGA TCGTTCACGA GACCGCACCG GCCTCCTATG GCTGGGCCAC CGTCGCCGGC TCCAACACCA ACACCATGTT CGATGTGGTG CGTGACAACC CGGCCGAGAG CCATCCGCTG CTGGAAGGCT GGATCCAGCG CGACCTGGCC GTGGAGCTGT TCCGTTCGGC CGGGCAGGAT TTCGAAGCGC TGAAGAAGAA GGCGCAGCAG CGTGACTTCA CCCCGGTGCC GCTGACCGGT GCCAGCCTGG ATGCGAAGTA CGCGGTGAAG ACCGAAGTGA TCACCTCGCA CAACGTGGCC GCGCGCCTGG AAGGCAGCAG CCACCCGGAC GAGACTGTCA TCTACAGTGC GCACTGGGAC CACATCGGCG TGGGCGAGCC CGACGCACGC GGCGACCGCA TCTTCAACGG CGCGCTGGAC AACGCCAGCG GCACCGCATC GCTGATCGAA CTTGCCCGCG GTTTCGCCAA GCAGAAGCGC CCGCAGCGCT CGGTGCTGTT CCTGGCGGTG ACCGCCGAAG AGAAGGGCCT GCTGGGTTCG GAGTACTACG CCACCCATCC GCTGTATCCG CTGGAAAAGA CCGTAGCGAT GATCAACATG GACGGTATGG CGCCGTTCGG CCCGTCGCGT GACTTCGGCA TCTACGGTGC CGCGCGCTTC GAACTGCTGG ACCAGCTGAA GGACGTGGCC AAGGGCTGGG ATATCCGCTA CACGCCGGAC CCGAAGCCGG AAGCCGGCCT GTTCTTCCGC TCCGATCACT TCCCGTTCGC CAAGCGCGGC GTGCCGGCGC TGTCGTGGTC GGCTGGCCAG GATTGGGTGG ACGGCGGCGT GGCGGCAGGC AAAAAGGCCT CGGAGGACTA CACCGCCAAG CGTTACCACC AGCAGGGCGA CGAATGGCAG CCGGACTGGG TGTTCGCCGG TGCCGCCCGC GACCTGGAAG TGCTGTACAC GCTGGGCAAC CAGCTGGCCA ACTCGCGCAG CTGGCCGAAC TGGAGCAAGG ACGAGTCGTT CCGCGCCGTG CGTGACGCCA GCGCCGACCA GCGCAAATAA
|
Protein sequence | MKRAVLGVLA LSVSSALMAA TPKFDGARIS ADVKELASDA YEGRSPATAG EEKTVTYLSK QFADAGLQPG GDLKDGKRLW TQAVPLRKGD IVGAPQLALH QGGKTVSLEQ GKQIAVRAAM NGASNVDISK APLVFLGYGV KAPERNWDDF KGVDLKGKIA VVLINDPDFE TGQGDFDGKG MTYYGRWTYK YEEGARQGAL GVLIVHETAP ASYGWATVAG SNTNTMFDVV RDNPAESHPL LEGWIQRDLA VELFRSAGQD FEALKKKAQQ RDFTPVPLTG ASLDAKYAVK TEVITSHNVA ARLEGSSHPD ETVIYSAHWD HIGVGEPDAR GDRIFNGALD NASGTASLIE LARGFAKQKR PQRSVLFLAV TAEEKGLLGS EYYATHPLYP LEKTVAMINM DGMAPFGPSR DFGIYGAARF ELLDQLKDVA KGWDIRYTPD PKPEAGLFFR SDHFPFAKRG VPALSWSAGQ DWVDGGVAAG KKASEDYTAK RYHQQGDEWQ PDWVFAGAAR DLEVLYTLGN QLANSRSWPN WSKDESFRAV RDASADQRK
|
| |