| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0414 |
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| Symbol | |
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| ID | 6478284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 492690 |
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| End bp | 493952 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642729559 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002026802 |
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| Protein GI | 194364192 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.356478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.119777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGC CCGCACTGAC GCAGCGTCTG GAAACCCTCT GGCGGATGGA GTCGCCGGTG
TTGATCGCGC GCCTGGCGCG GCTGCTCGGG GGCGATGTCG GCCGCGCCGA GGAGCTGGCC
CAGGACACCT GGCTGGCCGC GCTGGAGCGC TGGCCGGAGC AGGGCATCCC GGACAACCCC
GGAGCCTGGC TGATGACCAC TGCGCGCAAC CGTGCCATTG ATGTGCTGCG CCAGCACCAG
CGGGTGGCGC AGCAGCATGC GCAGTGGGGC GAGGAACTGC ATCCGGCGCC GCTGCCGGCG
CCCGATGACA GTCAAGCGCT GGAAGATGAT CTGGGTGACG ACCTGCTGCG GCTGATGTTC
GTGGCCTGCC ATCCGGTGCT GCCGGCCGAT GCACGGGTGG CATTGACCCT GCGCCTGCTG
GGTGGCCTGA CCACTGTCGA GATCGCGCGC GCCTTCCTGC AGCCCGAGCC GACCATCGCC
CAGCGCATCG TGCGCGCCAA GCGCACCTTG GCGCAGAAGC AGGTGCCCTA CGAGGTCCCG
CGTGCTGACG CGATGCCCGA GCGGCTTGGT TCGGTGCTGG AAGCGATCTA CCTGGTGTTC
AACGAAGGCT ATGCGGCCAG TGCCGGTGAC GACTGGATGC GCCCGGCACT GTGCGAGGAG
GCGCTGCGGC TCGCGCGCAT CCTGGCGCAC CGGCTGCCGG TGCCGCCGGT GCTGGGCCTG
CTGGCGCTGA TGGAGCTGCA GGCCTCGCGT GCCGCGGCAC GGACCGATGC GCAGGGCGTG
CCGGTACTGC TGGACCAGCA GAACCGCGCG CGCTGGGACT GGCTGCAGAT TGAACGCGGG
CAGCAGGTGC TGGCGCGCGC GCTGGCCGCC GGTGGCGCTG ATGATCCCTA TGTACTGCAG
GCGCGTATCG CAGCGTGCCA TGCAGCGGCG CGCCGCCCCG AGGATACCGA CTGGCCGCGC
ATCGCAGCGC TCTATACGCA GCTGCTGCAG GTGCAGCCCT CGCCGGTTGT TGCATTGAAC
CGGGTCGTGG CGGTGCTGCG CAGTGACGGT GCCTTCGCGG CGTGGGCGCA GCTGCAGCCG
TTGCTGGTGG ACGCGCGACT GCGTGAGTAC GCGCCGCTGC AGGTGGTGCG CGGGGAGTTA
CTACAGGCGC TGGGGCGCGA CCTGGACGCA CGTCACGCTT TTGCGGAAGC CGCCAGACTC
AGCCAGAACC AGGCAGAGCG GGGCCTGCTG CGGCAACGGG CCGGCCTGCC TCCCACGGAG
TGA
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| Protein sequence | MLEPALTQRL ETLWRMESPV LIARLARLLG GDVGRAEELA QDTWLAALER WPEQGIPDNP
GAWLMTTARN RAIDVLRQHQ RVAQQHAQWG EELHPAPLPA PDDSQALEDD LGDDLLRLMF
VACHPVLPAD ARVALTLRLL GGLTTVEIAR AFLQPEPTIA QRIVRAKRTL AQKQVPYEVP
RADAMPERLG SVLEAIYLVF NEGYAASAGD DWMRPALCEE ALRLARILAH RLPVPPVLGL
LALMELQASR AAARTDAQGV PVLLDQQNRA RWDWLQIERG QQVLARALAA GGADDPYVLQ
ARIAACHAAA RRPEDTDWPR IAALYTQLLQ VQPSPVVALN RVVAVLRSDG AFAAWAQLQP
LLVDARLREY APLQVVRGEL LQALGRDLDA RHAFAEAARL SQNQAERGLL RQRAGLPPTE
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