| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0404 |
|---|
| Symbol | |
|---|
| ID | 6478274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 481619 |
|---|
| End bp | 483235 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642729549 |
|---|
| Product | EAL domain protein |
|---|
| Protein accession | YP_002026792 |
|---|
| Protein GI | 194364182 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0754229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.162888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC TGCGCATCAT CATTGGTGGC ACCGCGCTGG CGCTGCTGGC CGCAGCGGTG
CCGATCGCGG TGATGGCCTA TGCCACCTGG GACCGTGCGG TCAGTGTCGA GCAGCAGCGC
CTGCGCGACA TCGCCGGCCG CGCGCTGCGC CGTTCCGACC AGTCCTACCA TGACGCGCTG
GCCGCGCTGA AGTCGGCGGA GGCGGGCGCC CATGTGCCGT GCAGCCCGGA CCATATCCAG
CGCATGCAGA CCCTGGTGAT GACCACGCCG TCGATCGACC AGATGGGCTA TTTCGAAGGC
GGCACGCTGC GGTGCACGTC GTGGGGCCCG TTCCTGGCCG ATGTGAAGCA GCCCAAGGCC
GACCATGTGA CCAGCGAAGG GGCCGGCATC GCGGTGGACG TGCGCCCCGA AGCCAGCGGC
CGCCGCCAGG TGCTGTCGAT CCTGTACGGC GCCTACGACG TACTGGTCGA CCCGCGCCGT
TTCGTCGATG TCATCGCAGA CCCCAACGTG CGCCTGGCCC TGGCCAGCCC GGACGGCCGC
CTGCTGGCCA AGCAGGACGG CATGGATCCG GCGCTGCTGG AGACCCTGCT GCGCAACCCG
GGCGAAGGGC TGGACCACAA CACCCTCTAC GCCACCGCCC GCAATGGCGA ATGGCTGGCG
ATCGCCACCA CGCCACGCAC GGCACTGGCC GCCACCTTCC GCCAGCAGGC ATGGCTGTAC
GTACCGCTCG GGTTGCTGAT GGCTGCCGTG GGTGCCGGCC TGGTGATCTG GCTGTCGCGC
CGCCGGCTGT CGCTGCGCGG CGAACTGGCC ACGGCGATCC GCCGCCGCGA GCTGTACCTG
CACTACCAGC CGATCATCGA ACTGGATACC GGCATCTGCG TCGGCGCCGA AGCATTGATT
CGCTGGCAGC GTCAGGATGG CACCCAGGTC CGCCCCGACC TGTTCATTCC CCTGGCCGAA
GAGACCGGCA TGATCGGCGC GATCACCGAC CTGGTGATCG AGAACGTGGT GCGCGACATG
CGCGAGCTGC TGGTGGCCGA CCGCAGCGCG CACATCGCGA TCAATCTCGC CGCCGAGGAC
ATCAGCAGTG GTCGTGCATT GAAGTTGATC GCCAAGCACA TGGCCGGCAG CGGCATCCTG
CCGCAGCAGA TCTGGATGGA AGCGACCGAG CACGGCTTCC TCGACCTGGA CCGCGCACGC
ACGATGCTGG CGCAGGCTCG CCGGGCCGGC CACAGCGTGG CGATCGATGA CTTCGGCGTG
GGCTTTTCCA GCCTGCAGTA CCTGGAGCAG CTGCCACTGG ATGCACTGAA GATCGACAAG
TCGTTCATCG ATGCGATCGG CACCGAGAGC GCCACCAGCC CGGTCACGCC GCACATCATC
GACATGGCCA AGGAGCTGGG CCTGTGGGTG GTCGCCGAGG GCGTGGAGAC CGAGGCACAG
CTGGCGTATC TGCATACCCG GAAGGTCGAG TTCGCGCAGG GTTGGCTGTT CTCGCGGCCG
CTGCCCCGCG ATGAGTTCGT GGTGTTTCAT CAGAAACGGC AGCAGCGCTA TGGCGCGGCG
CGGGAGCACA TGCAGAACCC GCGGAGCGTG CCGATCGAGC GTGAGGGGAT CGAGTAG
|
|---|
| Protein sequence | MSRLRIIIGG TALALLAAAV PIAVMAYATW DRAVSVEQQR LRDIAGRALR RSDQSYHDAL
AALKSAEAGA HVPCSPDHIQ RMQTLVMTTP SIDQMGYFEG GTLRCTSWGP FLADVKQPKA
DHVTSEGAGI AVDVRPEASG RRQVLSILYG AYDVLVDPRR FVDVIADPNV RLALASPDGR
LLAKQDGMDP ALLETLLRNP GEGLDHNTLY ATARNGEWLA IATTPRTALA ATFRQQAWLY
VPLGLLMAAV GAGLVIWLSR RRLSLRGELA TAIRRRELYL HYQPIIELDT GICVGAEALI
RWQRQDGTQV RPDLFIPLAE ETGMIGAITD LVIENVVRDM RELLVADRSA HIAINLAAED
ISSGRALKLI AKHMAGSGIL PQQIWMEATE HGFLDLDRAR TMLAQARRAG HSVAIDDFGV
GFSSLQYLEQ LPLDALKIDK SFIDAIGTES ATSPVTPHII DMAKELGLWV VAEGVETEAQ
LAYLHTRKVE FAQGWLFSRP LPRDEFVVFH QKRQQRYGAA REHMQNPRSV PIEREGIE
|
|---|
| |