Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0350 |
Symbol | |
ID | 6478220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 418193 |
End bp | 419707 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642729495 |
Product | succinate CoA transferase |
Protein accession | YP_002026738 |
Protein GI | 194364128 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | [TIGR03458] succinate CoA transferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0236116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTTG ATCGCATCGC CAACGCGCGT CTTCGTGACC GCGTGGTCTC CGCGGAGGCC GCAGCCGCGC TGATCCAGCC CGGTGAAACC GTGGCCATGA GCGGCTTTAC CGGCTCCGGG TATCCCAAGG CCGTTCCCGT CGAACTGGCC CGCCGCATCG AAGCGGTGCA TGCCCAGGGC CAGCCCTTCC AGATCAGCCT GATGACTGGC GCCTCCACCG CGCCGGAACT CGATGGCGCG CTGGCCAAGG CCGATGGCAT CGCCATGCGC ATGCCGTTCC AGAGCGACCC GGATGCGCGC AACCGCATCA ACGAGGGCAA GCTGGATTAC ATCGACATCC ACCTCAGCCA CGTGGCCCAG CACGTGTGGT TCGGTTTCTA TGGCGAGATC GATACCGCCG TGATCGAGGT CTCGGCCATC CGCGAGGATG GTTCGCTGGT GCCCTCCACC TCGGTCGGCA ACAACAAGAC CTGGCTGGAC CTGGCCAAGA AGGTGATCGT CGAGGTCAAC GAATGGCAGC CGGCCGGCGT CGACGGCATG CATGACATCT ACTACGGCAC CGCGCTGCCG CCGCACCGCA AGCCGATTCC GCTGGTGAAC GCCAACGACC GCATCGGCGA CACCGCGCTG CGCTGCGACC CGGACAAGAT CGTGGCCGTG GTGCGCACCA ACGGCCCGGA CCGCAACAGC CCGTTCAGCC CGATCGATGC GACCAGCGAG CAGATCGCGT CGCACCTGAT CGAATTCCTC AAGCACGAGG TGAAGAAGGG CCGCCTGCCG CCGAACCTGC TGCCGCTGCA GTCGGGCGTG GGCAACATCC CCAACGCCGT GCTGGCCGGC CTGGCCAAGA GCGGCTTCCG CGACCTGGCC GCGTTCACCG AAGTGATCCA GGACGGCATG CTCGATCTGC TGCGCGACGG CGTGCTGAGC TACGCCTCGT GCACCGGCTT CGCGCTGAGC CCGCAGGCCA ACGAGACGTT CAAGGAGAAC ATCGATTTCT ACCGCGAGCG CATCATCATG CGCACGCAGG AAATCTCCAA CCATCCGGAA CTGGTGCGCC GCCTGGGCTG CATCGGCATG AACGGCATGA TCGAGGTGGA CATCTACGGC AACGTCAATT CGACGCACGT GATGGGCACG CGGATCATGA ACGGCATCGG CGGTTCGGGT GACTTTGCCC GCAATGGTTT CCTGTCAGCG TTCCTGAGCC CGTCCACCGC GAAGAACGGC ACCATTTCGG CGATCGTGCC GATGGCCAGC CATGTCGACC ACACCGAGCA CGACGTGTCG GTGATCGTCA CCGAACAGGG CCTGGCCGAC CTGCGTGGCC TGACCCCGCG CAAGCGCGCG CAGGTGCTGA TCGACAACTG CGCGCATCCG GATTTCCGTC CGCAGCTGCA GGATTACTTC GACCGCGCCA GCCGCGAGAG CTACGGCAAG CACACCCCGC ACTTGCTGCC GGAAGCGCTG TCGTGGCACC AGCGTTGGCT GGATACCGGC ACGATGAAGG GCTGA
|
Protein sequence | MSVDRIANAR LRDRVVSAEA AAALIQPGET VAMSGFTGSG YPKAVPVELA RRIEAVHAQG QPFQISLMTG ASTAPELDGA LAKADGIAMR MPFQSDPDAR NRINEGKLDY IDIHLSHVAQ HVWFGFYGEI DTAVIEVSAI REDGSLVPST SVGNNKTWLD LAKKVIVEVN EWQPAGVDGM HDIYYGTALP PHRKPIPLVN ANDRIGDTAL RCDPDKIVAV VRTNGPDRNS PFSPIDATSE QIASHLIEFL KHEVKKGRLP PNLLPLQSGV GNIPNAVLAG LAKSGFRDLA AFTEVIQDGM LDLLRDGVLS YASCTGFALS PQANETFKEN IDFYRERIIM RTQEISNHPE LVRRLGCIGM NGMIEVDIYG NVNSTHVMGT RIMNGIGGSG DFARNGFLSA FLSPSTAKNG TISAIVPMAS HVDHTEHDVS VIVTEQGLAD LRGLTPRKRA QVLIDNCAHP DFRPQLQDYF DRASRESYGK HTPHLLPEAL SWHQRWLDTG TMKG
|
| |