Gene Smal_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0344 
Symbol 
ID6478214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp413218 
End bp413931 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID642729489 
Productpeptidase M15D vanX D-ala-D-ala dipeptidase 
Protein accessionYP_002026732 
Protein GI194364122 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA GGATCTGCAT TTCACTCGTA CTGGCGACTG CGCTGGCAGC GACCACCCGC 
GCCGCTGAGC CACCGCGCGT TTCACCGGCC ACTGATGCCG CCAGCGCCGG ATTAGTGGAG
ATCCGCACGT TGTCGCCAGG CATCGACATG GACATCCGCT ACGCCGGCGC CAACAACTTC
ACCGGTGCGC GCGTGCCGGG CTACGAGGCG CCGTCCTGCT ATCTGCTGGC GCCGGTGGCG
AAGGCGCTGG CGCAGGTGGA ACAGGACCTG CGCGCGGATG GCTTTGGCCT GCGCATCTAC
GACTGCTATC GGCCGGTACG TTCGGTGCAG GCCTTCATGG CCTGGGTGAA CGACCCCAGC
GAGCTTTCGC GGAAGGCTTT GCAGTACCCG GATCTGGACA AGCCACGGTT GCTGGCCGAC
GGCTACATCG CCGAGCGCTC CGGCCATAGC CGCGGCGCCA CGGTCGATCT CGGTCTGCTG
GATTGCCGCA ACGGTCGCTG CAAGCCGATG GACATGGGTA CCGACTTCGA TTTCTTCGGC
CCACGTGCGC ATACGCAGAC GAGCGGACTG AGCGATGCAC AGCAGGCCAA TCGGCAGCAG
CTGGTAAGCG CGATGGCCCG GCGAGGCTTC GCCAACTACC CGAAGGAGTG GTGGCACTAC
ACCCTGCAGC CCGAACCGGA CCCCGGCACC GCATACGACG TCCCCGTGCG GTAG
 
Protein sequence
MTSRICISLV LATALAATTR AAEPPRVSPA TDAASAGLVE IRTLSPGIDM DIRYAGANNF 
TGARVPGYEA PSCYLLAPVA KALAQVEQDL RADGFGLRIY DCYRPVRSVQ AFMAWVNDPS
ELSRKALQYP DLDKPRLLAD GYIAERSGHS RGATVDLGLL DCRNGRCKPM DMGTDFDFFG
PRAHTQTSGL SDAQQANRQQ LVSAMARRGF ANYPKEWWHY TLQPEPDPGT AYDVPVR