Gene Smal_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0343 
Symbol 
ID6478213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp411732 
End bp413285 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content67% 
IMG OID642729488 
Productbeta-lactamase 
Protein accessionYP_002026731 
Protein GI194364121 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.6779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATC TGCTGATCCT CGCAGCGGCA CTGACCGCTC CTTCCGCTTC GGCAGCCGAT 
ACCGCATCCA TCGATGCGGA TGTCGCCGCC GTGGTCCGCG TCGAGCATCT GCCCGGACTG
GCGATGGCGG TGGTCGAGAA CGGGCAGGTG GTCCATCGCC ATGTGGAAGG TACGCGTGGT
GATGGAGGCC GCATCGATGA CGACACGCTG TTCAAGATTG CCTCCAACAG CAAGGCGATG
ACCGCCGCGC TGCTGGCACG GCTGGTGCAA CAGGGCAAGC TGCGCTGGGA CGATCCAGTG
CAGCGGCATC TGCCGGGCTT CCGAATGCAT GACGCGTGGG TCGGCCGGCA GATGCAGGTG
CGCGATCTGC TGATCCACAA CAGTGGGCTC GGATTAGGTG CCGGCGATCT GATGCTGTGG
CCGGAGCCGA ACGCGTTCAC CCGCGCCGAT ATCATCGCCG GACTGGCGCA CCTGAAGCCG
GTCAGCAGCT TCCGCAGCCA CTATGCCTAC GACAACCTGA TGTACGTGGT GGCCGGTGAA
GTGGCTGCTG CGGCCGGTGG CAAACCGTAC GACCAGCTGA TGCGCGAGCA GGTGTTTGAA
CCACTGGGCA TGACGCGCTG CCAAGTGGGG GCATGGTCGG TGAAGCGCGT GGGCAATGTG
GCGCAGCCGC ACGCCTGGCG TGGTGAACGC AACGAGGTGG TGAACGCCGA CGGTGAGACC
AGCCCTGACC TGCCGTCGAT GGCAGCTGGC GGCATCCGCT GTTCGCTGCG TGACATGACG
CGTTGGATGC AGGTGCTGCT GGATCCTGCC CTGGTGCCGG ACTGGCTGGG CAGCGAGCAG
CGGCGCACGC TGTGGACCCT GCACATGCCG ATGCCGCTGG GTGAGCGCCA GCGGCGCTGG
GACAACGCGC ACTTCCATGG CTACGGCTAC GGCTGGCGGG TGTCCGACAT GGATGGACAG
TGGAAGGTGG CGCACACCGG CACGCTGTCG GGCATGTACT CGTCGCTGGC GCTGCTGCCC
GACCGCAAGG TGGGCGTGGT GATGCTGATC AATGGCGAAG GCGAGGATGC GCGTGTCGCG
TTGATGCAGG CCGCGCTGAA GCGCTTCACC GCGCCAGATG AAGCGCGGCC TGCGATGGAG
TACCTGGCCG AACTGAAGGC GGACCAGGCA ACGCGGGCGG CGACCGGCCA TTCGCGGCCG
TCCACCGTTG CGGCGCAGGA GACGAGCCGC ACGGATCTGC CACGCTGGCA GGGCCGTTAC
CGCGATCCGT GGCTGGGTCC GGCCTCACTG TGCCCGGGCG CGGACGGCCT GCGCTTCAGC
GTGGACAAGT CGCCAAAGCT GCGGGCCACG GTGCTGCAGT TGCAGGGGCG TTGGCTGCTG
CGCTGGGATA CGCTGGGCGA AGACGCACAG GCCTGGCTGC AGCCCGGTGA CGGTGCGCCG
CCCACGCTGG ACCTGCGTGC CATCGACCCG GACATCGACT TCAGCTATGA CTTCCAGGAT
CTGCATTTCA CTCGTACTGG CGACTGCGCT GGCAGCGACC ACCCGCGCCG CTGA
 
Protein sequence
MHHLLILAAA LTAPSASAAD TASIDADVAA VVRVEHLPGL AMAVVENGQV VHRHVEGTRG 
DGGRIDDDTL FKIASNSKAM TAALLARLVQ QGKLRWDDPV QRHLPGFRMH DAWVGRQMQV
RDLLIHNSGL GLGAGDLMLW PEPNAFTRAD IIAGLAHLKP VSSFRSHYAY DNLMYVVAGE
VAAAAGGKPY DQLMREQVFE PLGMTRCQVG AWSVKRVGNV AQPHAWRGER NEVVNADGET
SPDLPSMAAG GIRCSLRDMT RWMQVLLDPA LVPDWLGSEQ RRTLWTLHMP MPLGERQRRW
DNAHFHGYGY GWRVSDMDGQ WKVAHTGTLS GMYSSLALLP DRKVGVVMLI NGEGEDARVA
LMQAALKRFT APDEARPAME YLAELKADQA TRAATGHSRP STVAAQETSR TDLPRWQGRY
RDPWLGPASL CPGADGLRFS VDKSPKLRAT VLQLQGRWLL RWDTLGEDAQ AWLQPGDGAP
PTLDLRAIDP DIDFSYDFQD LHFTRTGDCA GSDHPRR