Gene Smal_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0336 
Symbol 
ID6478132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp401103 
End bp402404 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content68% 
IMG OID642729481 
Productamino acid permease-associated region 
Protein accessionYP_002026724 
Protein GI194364114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.733586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGC AGGACGAACC GCAGCTGCAG CGCGCGGTCA GCCGCTGGCA GATCGTCGGC 
CTGTCGATCA ACGACGTGAT CGGCAGCGGC ATCTACCTGC TGCCGGCCGC CACCGTCGCC
CTGCTCGGCC CCTTCAGCCT GTGGGGCGTG GTCGCCGCCG GCATCGTCGT CGCGCTGCTG
GTGCTGTGCT ACGCACAGGC CGCCAGCTAC TTCGATGAAC CCGGCGGCAG CTACCTGTAT
GCCCGCGAGG CGTTCGGCCG TTTTGCCGGG TTCGAGATCG GCTGGATGAT CTGGCTGACC
CGCATCAGCT CGGCGGCCGC GCTCAGCAAT GCGCTGGCCG ATGCGGTGGC ACGCTTCTGG
CCCTGGGCCG GCGCCGGCAT GGGCCGCATC GCGGTGATCG TGGTGTCGCT GGGCTTCCTC
ACCGGCGTCA ACATCATCGG CGTGCGCTCG GCCGCGCGGA CCGGCGTGGT GCTGGTGATC
GGCAAGATGC TGCCGCTGCT GCTGTTCGTG GCCATCGGCG CGTTCTACAT CGATCCGCAG
CTGGTGTTCT CCGGCCAGCG CCCGGACCCG CACGACCTGC AGCGTATGGG TGAAGCCGCC
TTGCTGCTGC TGTACGCCTA CGCGGGCTTC GAGAACATTC CGGCTGCGGC CGGCGAGTAC
CGCAACCCAC GCCGCGATAT TCCATTCGCA CTGATCACCA TGATCATCAC CGTCACCGTC
ATCTATGGAG CGGTTCAGGT GGTGGCGCAG GGCACGCTGG CCGGGCTGTC CAGCTCGGCC
ACGCCGCTGG CCGACGCCGC CGCCGGCTTC GGTGGTGAGG CACTCGCGCT GATCCTCACC
GTGGGCGCGA CCATTTCCAT CCTCGGCACC AACAGCAACA CGATGATGAT GGGCCCGCGC
TTCCTGTTCG CGCTGGCGCG CGATGGCTAC GGGCCGAAGA TCCTGGCGCA GGTGCATCCG
CGCTTCCATA CACCGGCCGC ATCGATCCTG TGCCAGGGCC TGATCGCGCT CGGGCTGGCG
CTGTCGGGTT CGTTCGTGCA GCTGGCGCTG CTGTCGATGA CCACGCGCCT GTTCGCCTAC
ATCGGTACTG CCGCCGCAGT CCTGGTACTG GCCAAGCGCT ACGCCGACCG CCCCGGTGCG
CTGAAGCTGC CCGGTGGCCC GCTGATTCCG GTACTGGCGC TGTTGCTGTG CCTGGCCCTG
TTCGCCAGTG CCAGCTGGCA GAACATCGCC GCCGCGCTGG TCGCCTTCGC CATCGGCGCA
GTGATCTACA AACTGCCGCG CAAGGATGCC GACGCCGGGT GA
 
Protein sequence
MSAQDEPQLQ RAVSRWQIVG LSINDVIGSG IYLLPAATVA LLGPFSLWGV VAAGIVVALL 
VLCYAQAASY FDEPGGSYLY AREAFGRFAG FEIGWMIWLT RISSAAALSN ALADAVARFW
PWAGAGMGRI AVIVVSLGFL TGVNIIGVRS AARTGVVLVI GKMLPLLLFV AIGAFYIDPQ
LVFSGQRPDP HDLQRMGEAA LLLLYAYAGF ENIPAAAGEY RNPRRDIPFA LITMIITVTV
IYGAVQVVAQ GTLAGLSSSA TPLADAAAGF GGEALALILT VGATISILGT NSNTMMMGPR
FLFALARDGY GPKILAQVHP RFHTPAASIL CQGLIALGLA LSGSFVQLAL LSMTTRLFAY
IGTAAAVLVL AKRYADRPGA LKLPGGPLIP VLALLLCLAL FASASWQNIA AALVAFAIGA
VIYKLPRKDA DAG