| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0319 |
|---|
| Symbol | |
|---|
| ID | 6478115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 384335 |
|---|
| End bp | 385228 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642729464 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_002026707 |
|---|
| Protein GI | 194364097 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.102064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCCA ATTACCGCCA GTACTGGGAC CTGACCAAGC CCAAGGTCGT CGCCCTCATT
GTTTTCACTG CCCTGGTCGG CATGGTCCTG GCCATCCCCG GCGTGCCCAG CTGGGAGCAG
GTGCGCGCCG GCGTGCTCGG CTTCCTCGGC ATCTGGCTGG CGGCGTCGGC CGCGGCCGCG
ATCAACCAGC TGCTGGATGC GCACATCGAT GCGCAGATGG CACGTACCTC GTGGCGGCCG
CTGGTGGTGG GCAAGGTCAA GCCGTGGCAG GTGCTGGTGT TCGCCAGCGT GCTGATCGTG
CTGTCGATGG TGATCCTGGT GCTGTGGGTG AACCTGATCA CCGCAGTGCT GACCTTCGCC
TCGCTGATCG GTTACGCGGT CATCTACACC GTGTACCTGA AGCGTGCGAC CTCGCAGAAC
ATCGTCATCG GTGGCCTGGC CGGCGCGATG CCGCCGATGC TGGGCTGGGC CGCGGTGACC
GGCATGCAGG GCTCGTCGGA CTGGGCGTAC TCGTCGCTGC TGGTGCTGAT CATCTTCATC
TGGACGCCGC CGCACTTCTG GGCGCTGGCG ATCTTCCGCC GCGAGGATTA TGCCAAGGCG
GAAATTCCGA TGCTGCCGGT GACCCACGGC GTGGTGCACA CCCGCAAGCA GATCATGGTG
TATTCGGTGG TGCTGGCGCT GGTCTGCCTG CTGCCTTACC TGGTGGGCAT GAGCGGTGCG
TTCTACCTGG GCGGCGCGAT CGTGCTCAAC GCCGTGTTCC TCTGGTACGC CTGGCGCATG
CTGGACCCGC CGGACGAACT GTTCTCGATG AAGATGTTCT ATTACTCCAT CGTCTACCTG
ATGGCGCTGT TTGCGTTCCT GCTGGTCGAC CACTGGATCC TGCCCTGGTT GTGA
|
|---|
| Protein sequence | MFSNYRQYWD LTKPKVVALI VFTALVGMVL AIPGVPSWEQ VRAGVLGFLG IWLAASAAAA
INQLLDAHID AQMARTSWRP LVVGKVKPWQ VLVFASVLIV LSMVILVLWV NLITAVLTFA
SLIGYAVIYT VYLKRATSQN IVIGGLAGAM PPMLGWAAVT GMQGSSDWAY SSLLVLIIFI
WTPPHFWALA IFRREDYAKA EIPMLPVTHG VVHTRKQIMV YSVVLALVCL LPYLVGMSGA
FYLGGAIVLN AVFLWYAWRM LDPPDELFSM KMFYYSIVYL MALFAFLLVD HWILPWL
|
|---|
| |