Gene Smal_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0318 
Symbol 
ID6478114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp383167 
End bp384330 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID642729463 
Productcytochrome oxidase assembly 
Protein accessionYP_002026706 
Protein GI194364096 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.14987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT CCGCGCGTCC GGCGCTGCAC CGCAATTTCC ACCGCCTGGC GTGGTTCGCC 
ATGATCATGA CTGCGAGCAC GATCATGTTC GGTGCGTTCG TGCGTCTGTC CGATGCCGGC
CTGAGCTGCC CGGACTGGCC GACCTGCTAT GGGCAGGCCA CCTGGCCGCA GCATGTGGAA
GAGACCCTGG GCCACCCGGC GACGGAGATC CGTCCGCTGG AAACGCACAA GGCCTGGCGT
GAGCAGGTGC ACCGCTTCCT GGCCGGCGCG CTGGGCATCG AGATCCTGAC CCTGGCGCTG
CTGGCCACGC GCAAGCGGCG ATTCGGAAGC ACGGCGGTGG TGACCGCCTG CGTGCTGGTG
GCCGCCGGCA TACCGCTGTA CATGATGGGC TGGCATGGCA CGGCCAGCGC CCTGGCGCTG
ATCGGCGAGG CGATCCTGCT GATCGCCGCG CTGCGCTGGA GCAACATCGA CCTCGCCCGC
GCTGCGTTGC TGACCTTGGC GGTGGTGATC TTCCAGGCCC TGCTGGGCAT GTGGACGGTG
ACCCTGCTGC TGAAGCCGGT GGTGGTGATG GGCCATCTGC TGGGCGGCAT GCTGATGTTC
GGCCTGCTGG TGTGGATGGC GTGGCGCGCC ACGCACATGC CGATCACCCT GGCCGAAGCA
CCGAAGCTGA AGTGGCTGCT GCGCATCGGC GTGGCGGTGC TGGTCACCCA GATCGCACTG
GGCGGTTGGG TCAGCGCCAA CTACGCGGCG CTGGCCTGCG GCGGCGGCAG TGCCTCGCTG
GACAACTTCC CGCGCTGCGC CAACCAGTGG TGGCCGCAGC ACAATTTCGT CGAGGGCTTC
ACCCTGTGGC GCGGCATCGG CGTGGACTAC GAAGGGGGCG TGCTGGATGG CGCCTCGCGT
ATCGCCATCC AGATGGCGCA CCGCATGTTC GCGGTGGTGG TGGCCGTTTA CCTGCTGTGG
CTGGGCGTGC GCCTGTTCCG GTTGCCGAGC ATGCGTGGCT GGGCCAGCGC GCTGATCGCG
CTGCTGGTGC TGCAGGTCAC CCTCGGCATC CTCAATGTAA AGCTGGCGCT GCCGCTGGAA
GTGGCGGTGG CCCACAACGG CGTGGCCGTT GCCCTGTTGT TCGTGCTGGT CAGCCTGCTG
GCCCGCCTGC GTGCCCCGGA CTGA
 
Protein sequence
MSLSARPALH RNFHRLAWFA MIMTASTIMF GAFVRLSDAG LSCPDWPTCY GQATWPQHVE 
ETLGHPATEI RPLETHKAWR EQVHRFLAGA LGIEILTLAL LATRKRRFGS TAVVTACVLV
AAGIPLYMMG WHGTASALAL IGEAILLIAA LRWSNIDLAR AALLTLAVVI FQALLGMWTV
TLLLKPVVVM GHLLGGMLMF GLLVWMAWRA THMPITLAEA PKLKWLLRIG VAVLVTQIAL
GGWVSANYAA LACGGGSASL DNFPRCANQW WPQHNFVEGF TLWRGIGVDY EGGVLDGASR
IAIQMAHRMF AVVVAVYLLW LGVRLFRLPS MRGWASALIA LLVLQVTLGI LNVKLALPLE
VAVAHNGVAV ALLFVLVSLL ARLRAPD