Gene Smal_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0311 
Symbol 
ID6478107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp378139 
End bp379746 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content64% 
IMG OID642729456 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_002026699 
Protein GI194364089 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.1094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACT CGGCAGTTGG GCACGACGAT CACCATCACC AGCAGAGTTT CTTCGAGCGT 
TGGTTCTTCT CGACCAACCA CAAGGACATC GGCACGCTGT ACCTGGGCTT CAGCTTCATC
ATGTTCATCA TCGGCGCGGC GATGAGCGTG GTGATCCGGG CCGAACTGGC GCAGCCGGGC
CTGCAGTTCG TCAAGCCCGA GTTCTTCAAC CAGATGACCA CCGTGCATGC GCTGGTGATG
ATCTTCGGTG GCGTGATGCC GGCCTTCGTC GGCCTCGCCA ACTGGATGAT CCCGCTGCAG
ATCGGCGCGC CGGACATGGC GCTGCCGCGC ATGAACAACT GGTCGTTCTG GCTGCTGCCG
GTGGCGTTCA GCCTGCTGCT GCTGACCCTG TTCCTGCCCG GCGGCGCGCC GGCCGGTGGC
TGGACGCTGT ACCCGCCGCT GTCGCTGCAG GGCGGCTACA ACGTCGCCTT CAGCGTGTTC
GCCATCCATG TGGCCGGCAT CAGTTCGATC ATGGGCGCGA TCAACATCAT CGCCACCGTG
CTGAACATGC GTGCGCCGGG CATCGATCTG CTGAAGATGC CGATCTTCTG CTGGGCCTGG
CTGATCACCG CGTTCCTGCT GATCGCGGTG ATGCCGGTGC TGGCTGGCGC GGTAACCATG
CTGCTGACCG ACAAGTTCTT CGGCACCAGC TTCTTCAACG CCGCCGGTGG CGGTGACCCG
GTGATGTACC AGCACATCTT CTGGTTCTTC GGGCACCCCG AGGTCTACAT CATGATCCTG
CCCGCCTTCG GCGTGGTCAG CGAGATCATC CCGACCTTCA GCCGCAAGCC GCTGTTCGGC
TACCAGGCGA TGGTGTACGC CACCGCGGCC ATCGCGTTCC TGTCGTTCAT CGTCTGGGCC
CACCACATGT TCACCGTGGG CATGCCGCTG GGCGGCGAGA TCTACTTCAT GTTCGCCACC
ATGCTGATCT CGATCCCGAC CGGCGTGAAG GTGTTCAACT GGGTCAGCAC CATGTGGCGT
GGCTCGCTGA CGTTCGAGGC ACCGATGCTG TGGTCGGTGG CCTTCGTCAT CCTGTTCACC
ATTGGTGGCT TCTCCGGCCT GATGCTGGCG ATCGTCGCCG CCGACTTCCA GTACCACGAT
ACCTACTTCG TGGTCGCGCA CTTCCACTAC GTGCTGGTGA CCGGCGCGGT GTTCGCGCTG
ATCGCCGCGG TGTACTACTG GTGGCCGAAG TGGACCGGGC GGATGTATAG CGAGAAGTGG
GCCAAGGTGC ACTTCTGGTG GTCGATCGTG TTCGTCAACC TGCTGTTCTT CCCGCAGCAC
TTCCTCGGCC TGGCCGGCAT GCCGCGGCGT ATTCCCGACT ACAGCGTGGC CTTCGCCGAC
TGGAACCTGA TCAGCTCGAT CGGTGCGTTC GGCATGTTCG CCACGCCGTT CATGATGGCC
GCGATCCTGC TGTCCTCGCT GCGCAACGGT GAGAAGGCCG AGGCCCGTTC CTGGGAAGGT
GCGCGCGGCC TGGAATGGAC GCTGCCGTCG CCGGCGCCGG CGCACACCTT CACCACGCCG
CCGACGATCC GCCCGGGCGA CCTGGCACAC GACGACATCA GTCATTGA
 
Protein sequence
MAHSAVGHDD HHHQQSFFER WFFSTNHKDI GTLYLGFSFI MFIIGAAMSV VIRAELAQPG 
LQFVKPEFFN QMTTVHALVM IFGGVMPAFV GLANWMIPLQ IGAPDMALPR MNNWSFWLLP
VAFSLLLLTL FLPGGAPAGG WTLYPPLSLQ GGYNVAFSVF AIHVAGISSI MGAINIIATV
LNMRAPGIDL LKMPIFCWAW LITAFLLIAV MPVLAGAVTM LLTDKFFGTS FFNAAGGGDP
VMYQHIFWFF GHPEVYIMIL PAFGVVSEII PTFSRKPLFG YQAMVYATAA IAFLSFIVWA
HHMFTVGMPL GGEIYFMFAT MLISIPTGVK VFNWVSTMWR GSLTFEAPML WSVAFVILFT
IGGFSGLMLA IVAADFQYHD TYFVVAHFHY VLVTGAVFAL IAAVYYWWPK WTGRMYSEKW
AKVHFWWSIV FVNLLFFPQH FLGLAGMPRR IPDYSVAFAD WNLISSIGAF GMFATPFMMA
AILLSSLRNG EKAEARSWEG ARGLEWTLPS PAPAHTFTTP PTIRPGDLAH DDISH